Detailed information NTG0397728

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HRS04_RS20895
• Genome accession: NZ_CP054169
• Coordinates: 4124716..4125699 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain STO_Bone1B
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4119716..4130699

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRS04_RS20870 (HRS04_20730)	-	4120865..4120972 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRS04_RS20875 (HRS04_20735)	-	4121348..4121455 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRS04_RS20880 (HRS04_20740)	-	4121831..4121938 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRS04_RS20885 (HRS04_20745)	yhjV	4122414..4123685 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
HRS04_RS20890 (HRS04_20750)	dppF	4123715..4124719 (-)	1005	WP_000107024.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HRS04_RS20895 (HRS04_20755)	amiE	4124716..4125699 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
HRS04_RS20900 (HRS04_20760)	dppC	4125710..4126612 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HRS04_RS20905 (HRS04_20765)	dppB	4126622..4127641 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HRS04_RS20910 (HRS04_20770)	dppA	4127792..4129399 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=397728 HRS04_RS20895 WP_001196486.1 4124716..4125699(-) (amiE) [Escherichia coli strain STO_Bone1B]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=397728 HRS04_RS20895 WP_001196486.1 4124716..4125699(-) (amiE) [Escherichia coli strain STO_Bone1B]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGTAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404