Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GII85_RS06015 Genome accession   NZ_CP045817
Coordinates   1173166..1173357 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain P5_B1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1168166..1178357
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII85_RS05985 (GII85_05985) argF 1169029..1169988 (+) 960 WP_041850983.1 ornithine carbamoyltransferase -
  GII85_RS05990 (GII85_05990) yjzC 1170074..1170253 (+) 180 WP_003245356.1 YjzC family protein -
  GII85_RS05995 (GII85_05995) yjzD 1170299..1170484 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GII85_RS06000 (GII85_06000) - 1170734..1171468 (+) 735 WP_041850982.1 hypothetical protein -
  GII85_RS06005 (GII85_06005) - 1171550..1172107 (+) 558 WP_014476424.1 hypothetical protein -
  GII85_RS06010 (GII85_06010) med 1172198..1173151 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  GII85_RS06015 (GII85_06015) comZ 1173166..1173357 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GII85_RS06020 (GII85_06020) yjzB 1173387..1173626 (-) 240 WP_003232972.1 spore coat protein YjzB -
  GII85_RS06025 (GII85_06025) fabH 1173791..1174729 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  GII85_RS06030 (GII85_06030) fabF 1174752..1175993 (+) 1242 WP_041850981.1 beta-ketoacyl-ACP synthase II -
  GII85_RS06035 (GII85_06035) yjaZ 1176069..1176854 (+) 786 WP_032721346.1 DUF2268 domain-containing protein -
  GII85_RS06040 (GII85_06040) appD 1177046..1178032 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=397722 GII85_RS06015 WP_003224559.1 1173166..1173357(+) (comZ) [Bacillus subtilis strain P5_B1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=397722 GII85_RS06015 WP_003224559.1 1173166..1173357(+) (comZ) [Bacillus subtilis strain P5_B1]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATACAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment