Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GII86_RS04770 Genome accession   NZ_CP045816
Coordinates   933114..933908 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain P5_B2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 928114..938908
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII86_RS04740 (GII86_04740) sxzA 928953..929984 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  GII86_RS04745 (GII86_04745) yfhB 930099..930980 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  GII86_RS04750 (GII86_04750) yfhC 931068..931652 (+) 585 WP_046160214.1 nitroreductase -
  GII86_RS04755 (GII86_04755) yfhD 931691..931882 (-) 192 WP_003233561.1 YfhD family protein -
  GII86_RS04760 (GII86_04760) yfhE 931949..932059 (-) 111 WP_003223230.1 YfhE family protein -
  GII86_RS04765 (GII86_04765) yfhF 932114..933025 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  GII86_RS04770 (GII86_04770) recX 933114..933908 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  GII86_RS04775 (GII86_04775) yfhH 933910..934224 (+) 315 WP_003244592.1 YfhH family protein -
  GII86_RS04780 (GII86_04780) yfhI 934367..935560 (+) 1194 WP_003243500.1 MFS transporter -
  GII86_RS04785 (GII86_04785) sspK 935592..935744 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  GII86_RS04790 (GII86_04790) yfhJ 935869..936138 (+) 270 WP_015252516.1 YfhJ family protein -
  GII86_RS04795 (GII86_04795) yfhK 936283..936801 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  GII86_RS04800 (GII86_04800) spdL 936886..937218 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  GII86_RS04805 (GII86_04805) ephM 937205..938065 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=397635 GII86_RS04770 WP_003243354.1 933114..933908(+) (recX) [Bacillus subtilis strain P5_B2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=397635 GII86_RS04770 WP_003243354.1 933114..933908(+) (recX) [Bacillus subtilis strain P5_B2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment