Detailed information NTG0397607

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HRS05_RS05425
• Genome accession: NZ_CP054161
• Coordinates: 1159284..1160267 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain STO_Bone2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1154284..1165267

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRS05_RS05410 (HRS05_05350)	dppA	1155584..1157191 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
HRS05_RS05415 (HRS05_05355)	dppB	1157342..1158361 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HRS05_RS05420 (HRS05_05360)	dppC	1158371..1159273 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HRS05_RS05425 (HRS05_05365)	amiE	1159284..1160267 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
HRS05_RS05430 (HRS05_05370)	dppF	1160264..1161268 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HRS05_RS05435 (HRS05_05375)	yhjV	1161298..1162569 (-)	1272	WP_235163852.1	amino acid permease	-
HRS05_RS05440 (HRS05_05380)	-	1163045..1163152 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRS05_RS05445 (HRS05_05385)	-	1163529..1163636 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
HRS05_RS05450 (HRS05_05390)	-	1164012..1164119 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=397607 HRS05_RS05425 WP_001196487.1 1159284..1160267(+) (amiE) [Escherichia coli strain STO_Bone2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=397607 HRS05_RS05425 WP_001196487.1 1159284..1160267(+) (amiE) [Escherichia coli strain STO_Bone2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407