Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GII88_RS09975 | Genome accession | NZ_CP045814 |
| Coordinates | 1944433..1944861 (+) | Length | 142 a.a. |
| NCBI ID | WP_003182220.1 | Uniprot ID | A0A1Y0YFI7 |
| Organism | Bacillus licheniformis strain P8_B2 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1939433..1949861
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII88_RS09950 (GII88_09950) | - | 1939616..1940224 (+) | 609 | WP_009328237.1 | flavin reductase family protein | - |
| GII88_RS09955 (GII88_09955) | wrbA | 1940425..1941036 (+) | 612 | WP_003182210.1 | NAD(P)H:quinone oxidoreductase | - |
| GII88_RS22625 | - | 1941357..1941497 (+) | 141 | WP_003182211.1 | hypothetical protein | - |
| GII88_RS09960 (GII88_09960) | - | 1941490..1942323 (+) | 834 | WP_003182213.1 | prohibitin family protein | - |
| GII88_RS09965 (GII88_09965) | - | 1942414..1943175 (+) | 762 | WP_003182215.1 | hypothetical protein | - |
| GII88_RS09970 (GII88_09970) | - | 1943235..1944074 (+) | 840 | WP_003182218.1 | thymidylate synthase | - |
| GII88_RS09975 (GII88_09975) | nucA/comI | 1944433..1944861 (+) | 429 | WP_003182220.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| GII88_RS09980 (GII88_09980) | lexA | 1945057..1945680 (-) | 624 | WP_003182222.1 | transcriptional repressor LexA | - |
| GII88_RS09985 (GII88_09985) | yneA | 1945833..1946144 (+) | 312 | WP_003182225.1 | cell division suppressor protein YneA | - |
| GII88_RS09990 (GII88_09990) | - | 1946163..1946810 (+) | 648 | WP_003182227.1 | recombinase family protein | - |
| GII88_RS09995 (GII88_09995) | - | 1946876..1947109 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| GII88_RS10000 (GII88_10000) | tkt | 1947276..1949279 (+) | 2004 | WP_009328229.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15332.29 Da Isoelectric Point: 7.8987
>NTDB_id=397585 GII88_RS09975 WP_003182220.1 1944433..1944861(+) (nucA/comI) [Bacillus licheniformis strain P8_B2]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
Nucleotide
Download Length: 429 bp
>NTDB_id=397585 GII88_RS09975 WP_003182220.1 1944433..1944861(+) (nucA/comI) [Bacillus licheniformis strain P8_B2]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |