Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GII90_RS07580 Genome accession   NZ_CP045811
Coordinates   1453587..1454051 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain P9_B1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1448587..1459051
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII90_RS07560 (GII90_07560) kinA 1449053..1450873 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  GII90_RS07565 (GII90_07565) dapX 1450884..1452065 (-) 1182 WP_003232415.1 aminotransferase A -
  GII90_RS07570 (GII90_07570) - 1452267..1452428 (-) 162 WP_003245246.1 hypothetical protein -
  GII90_RS07575 (GII90_07575) cheV 1452632..1453543 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  GII90_RS07580 (GII90_07580) kre 1453587..1454051 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GII90_RS07585 (GII90_07585) ykuC 1454177..1455469 (-) 1293 WP_003245267.1 MFS transporter -
  GII90_RS07590 (GII90_07590) ltdD 1455545..1456039 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  GII90_RS07595 (GII90_07595) ppeE 1456096..1456956 (-) 861 WP_003232400.1 metallophosphoesterase -
  GII90_RS07600 (GII90_07600) fadH 1457099..1457863 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=397412 GII90_RS07580 WP_003232406.1 1453587..1454051(-) (kre) [Bacillus subtilis strain P9_B1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=397412 GII90_RS07580 WP_003232406.1 1453587..1454051(-) (kre) [Bacillus subtilis strain P9_B1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment