Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | GE073_RS10465 | Genome accession | NZ_CP045802 |
| Coordinates | 2454771..2455166 (-) | Length | 131 a.a. |
| NCBI ID | WP_028599611.1 | Uniprot ID | A0A5Q2NZD9 |
| Organism | Paenibacillus sp. B01 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 2449771..2460166
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE073_RS10435 (GE073_10435) | - | 2450340..2450786 (-) | 447 | WP_028599602.1 | ribonuclease domain-containing protein | - |
| GE073_RS10440 (GE073_10440) | - | 2450783..2451058 (-) | 276 | WP_028599603.1 | barstar family protein | - |
| GE073_RS10445 (GE073_10445) | - | 2451139..2451579 (-) | 441 | WP_028599604.1 | ribonuclease domain-containing protein | - |
| GE073_RS10450 (GE073_10450) | - | 2451793..2453331 (+) | 1539 | WP_101808980.1 | ATP-binding protein | - |
| GE073_RS10455 (GE073_10455) | - | 2453321..2454034 (+) | 714 | WP_028599605.1 | response regulator | - |
| GE073_RS10460 (GE073_10460) | comJ | 2454198..2454683 (-) | 486 | WP_153783426.1 | competence protein ComJ | - |
| GE073_RS10465 (GE073_10465) | nucA/comI | 2454771..2455166 (-) | 396 | WP_028599611.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| GE073_RS10470 (GE073_10470) | - | 2455445..2456917 (+) | 1473 | WP_164820099.1 | sensor histidine kinase | - |
| GE073_RS10475 (GE073_10475) | - | 2456952..2457575 (-) | 624 | WP_028599613.1 | response regulator transcription factor | - |
| GE073_RS10480 (GE073_10480) | - | 2457876..2458202 (+) | 327 | WP_028599614.1 | hypothetical protein | - |
| GE073_RS10485 (GE073_10485) | - | 2458246..2459313 (+) | 1068 | WP_043111535.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| GE073_RS10490 (GE073_10490) | - | 2459347..2459787 (+) | 441 | WP_028599616.1 | phage tail tube protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14021.67 Da Isoelectric Point: 5.7002
>NTDB_id=397331 GE073_RS10465 WP_028599611.1 2454771..2455166(-) (nucA/comI) [Paenibacillus sp. B01]
MLAFMAALFPGASVRTEAAAGYDAVIYFPFDRYPLTGDHIRDAIADGHSAICTIDRAGADANRKESLKGIPTKSGYDRDE
WPMAMCDEGGAGADVRYVPSSDNRGAGAWVGNQLSSYANGKRIKFVMSYGS
MLAFMAALFPGASVRTEAAAGYDAVIYFPFDRYPLTGDHIRDAIADGHSAICTIDRAGADANRKESLKGIPTKSGYDRDE
WPMAMCDEGGAGADVRYVPSSDNRGAGAWVGNQLSSYANGKRIKFVMSYGS
Nucleotide
Download Length: 396 bp
>NTDB_id=397331 GE073_RS10465 WP_028599611.1 2454771..2455166(-) (nucA/comI) [Paenibacillus sp. B01]
ATGCTCGCCTTTATGGCGGCGCTGTTTCCGGGCGCTTCCGTCCGGACCGAGGCGGCAGCCGGCTATGACGCCGTCATTTA
TTTTCCGTTCGACCGCTACCCGCTGACCGGCGATCATATCCGCGACGCGATCGCGGACGGGCATTCGGCGATCTGCACGA
TCGATCGGGCCGGCGCGGACGCGAACCGCAAGGAGTCGCTCAAGGGCATCCCGACCAAAAGCGGCTACGACCGCGACGAA
TGGCCGATGGCGATGTGCGACGAAGGCGGTGCAGGCGCGGACGTGCGCTACGTGCCGTCCTCCGACAACCGCGGCGCAGG
GGCATGGGTCGGCAACCAGCTTTCCTCGTACGCGAACGGCAAGCGGATCAAGTTTGTCATGTCCTACGGCAGCTGA
ATGCTCGCCTTTATGGCGGCGCTGTTTCCGGGCGCTTCCGTCCGGACCGAGGCGGCAGCCGGCTATGACGCCGTCATTTA
TTTTCCGTTCGACCGCTACCCGCTGACCGGCGATCATATCCGCGACGCGATCGCGGACGGGCATTCGGCGATCTGCACGA
TCGATCGGGCCGGCGCGGACGCGAACCGCAAGGAGTCGCTCAAGGGCATCCCGACCAAAAGCGGCTACGACCGCGACGAA
TGGCCGATGGCGATGTGCGACGAAGGCGGTGCAGGCGCGGACGTGCGCTACGTGCCGTCCTCCGACAACCGCGGCGCAGG
GGCATGGGTCGGCAACCAGCTTTCCTCGTACGCGAACGGCAAGCGGATCAAGTTTGTCATGTCCTACGGCAGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
54.167 |
91.603 |
0.496 |