Detailed information NTG0397268

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: GH799_RS24010
• Genome accession: NZ_CP045795
• Coordinates: 1583957..1585054 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus 10329
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1578957..1590054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH799_RS23995 (GH799_23995)	-	1579621..1580676 (-)	1056	WP_005499297.1	HlyD family secretion protein	-
GH799_RS24000 (GH799_24000)	slyA	1580714..1581169 (-)	456	WP_005499300.1	transcriptional regulator SlyA	-
GH799_RS24005 (GH799_24005)	luxQ	1581381..1583957 (-)	2577	WP_005499304.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
GH799_RS24010 (GH799_24010)	luxP	1583957..1585054 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GH799_RS24015 (GH799_24015)	-	1585406..1585726 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
GH799_RS24020 (GH799_24020)	-	1585723..1586373 (-)	651	WP_005499314.1	YceH family protein	-
GH799_RS24025 (GH799_24025)	-	1586550..1586765 (-)	216	WP_005499315.1	hypothetical protein	-
GH799_RS24035 (GH799_24035)	-	1587092..1587406 (+)	315	WP_005453573.1	DUF496 family protein	-
GH799_RS24040 (GH799_24040)	-	1587529..1588866 (+)	1338	WP_021447933.1	MATE family efflux transporter	-
GH799_RS24045 (GH799_24045)	-	1588943..1589917 (-)	975	WP_005499317.1	Gfo/Idh/MocA family oxidoreductase	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=397268 GH799_RS24010 WP_005463467.1 1583957..1585054(-) (luxP) [Vibrio parahaemolyticus 10329]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=397268 GH799_RS24010 WP_005463467.1 1583957..1585054(-) (luxP) [Vibrio parahaemolyticus 10329]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGAATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTACCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAATATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGCCCGAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCCTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGCGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCACCAAGTGAACCAAGATAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAATACCCAGATGTGGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTAATGATTAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCGATGGCA
GAGGCGATCAAATGGGATTTGGAAGGTAAGCCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAGCGTGCATTTAGATACTCAGATAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644