Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | HRD51_RS35355 | Genome accession | NZ_CP054019 |
| Coordinates | 8044925..8045515 (+) | Length | 196 a.a. |
| NCBI ID | WP_235096187.1 | Uniprot ID | - |
| Organism | Streptomyces sp. A1-5 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 8039925..8050515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HRD51_RS35320 (HRD51_34885) | - | 8040445..8040960 (-) | 516 | WP_235095142.1 | winged helix-turn-helix domain-containing protein | - |
| HRD51_RS35325 (HRD51_34890) | - | 8041433..8041954 (+) | 522 | WP_205368685.1 | hypothetical protein | - |
| HRD51_RS35330 (HRD51_34895) | - | 8041951..8043114 (+) | 1164 | WP_205368684.1 | FAD-dependent monooxygenase | - |
| HRD51_RS35335 (HRD51_34900) | - | 8043224..8043460 (+) | 237 | WP_205368683.1 | hypothetical protein | - |
| HRD51_RS35340 (HRD51_34905) | - | 8043460..8044029 (+) | 570 | WP_235095144.1 | cytochrome P450 | - |
| HRD51_RS35345 (HRD51_34910) | - | 8044016..8044456 (+) | 441 | WP_235095145.1 | cytochrome P450 | - |
| HRD51_RS35350 (HRD51_34915) | - | 8044529..8044753 (-) | 225 | WP_205368681.1 | hypothetical protein | - |
| HRD51_RS35355 (HRD51_34920) | clpP | 8044925..8045515 (+) | 591 | WP_235096187.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| HRD51_RS35360 (HRD51_34925) | - | 8045641..8046330 (+) | 690 | WP_235095146.1 | ATP-dependent Clp protease proteolytic subunit | - |
| HRD51_RS35365 (HRD51_34930) | - | 8046635..8047006 (+) | 372 | WP_039630418.1 | helix-turn-helix domain-containing protein | - |
| HRD51_RS35370 (HRD51_34935) | - | 8047029..8048402 (-) | 1374 | WP_235095147.1 | FAD-dependent oxidoreductase | - |
| HRD51_RS42280 | - | 8048541..8048891 (+) | 351 | Protein_6978 | DUF6214 family protein | - |
| HRD51_RS42285 | - | 8049078..8049386 (+) | 309 | WP_328285929.1 | DUF6214 family protein | - |
| HRD51_RS35380 (HRD51_34945) | - | 8049383..8050045 (-) | 663 | WP_235095149.1 | TetR/AcrR family transcriptional regulator | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 20858.68 Da Isoelectric Point: 4.6684
>NTDB_id=397246 HRD51_RS35355 WP_235096187.1 8044925..8045515(+) (clpP) [Streptomyces sp. A1-5]
MASPAPGGGLGDQVFSRLLNDRIIFLGQEVDDEIANKITAQLLMLAAESENDIYLYINSPGGSITAGMAVYDTMNYIKND
VVTIAMGFCASMGQFLLTAGAKGKRFALPHTKILMHQPSAGLAGTASDVRIYADQLLKTKREMAELIAANSGNSVETITK
DSDRDRWFTAEEARQYGLIDKVMTSTGDAPGGGGTA
MASPAPGGGLGDQVFSRLLNDRIIFLGQEVDDEIANKITAQLLMLAAESENDIYLYINSPGGSITAGMAVYDTMNYIKND
VVTIAMGFCASMGQFLLTAGAKGKRFALPHTKILMHQPSAGLAGTASDVRIYADQLLKTKREMAELIAANSGNSVETITK
DSDRDRWFTAEEARQYGLIDKVMTSTGDAPGGGGTA
Nucleotide
Download Length: 591 bp
>NTDB_id=397246 HRD51_RS35355 WP_235096187.1 8044925..8045515(+) (clpP) [Streptomyces sp. A1-5]
CTGGCATCGCCAGCCCCCGGCGGCGGTCTCGGTGATCAGGTCTTCAGCAGGCTGCTGAATGACCGCATCATTTTCCTCGG
GCAGGAAGTCGACGACGAGATCGCAAACAAGATCACCGCGCAGTTGCTGATGCTTGCGGCGGAATCCGAGAACGACATCT
ACCTTTACATCAATTCTCCCGGCGGTTCGATCACGGCGGGCATGGCCGTCTACGACACGATGAACTACATCAAGAACGAT
GTGGTCACCATCGCCATGGGCTTCTGCGCTTCCATGGGGCAGTTCCTGCTCACCGCGGGTGCCAAGGGCAAGCGTTTCGC
GCTGCCGCACACGAAGATCCTCATGCACCAGCCCTCCGCGGGGCTCGCCGGCACCGCCTCCGACGTGCGGATCTACGCGG
ACCAACTGCTCAAGACCAAGCGGGAGATGGCCGAGCTCATCGCGGCGAACTCCGGCAACAGCGTCGAGACGATCACCAAG
GACTCTGACCGCGACCGGTGGTTCACCGCGGAAGAGGCCCGGCAGTACGGACTCATCGACAAGGTCATGACCTCCACCGG
GGACGCTCCTGGCGGCGGCGGCACCGCCTGA
CTGGCATCGCCAGCCCCCGGCGGCGGTCTCGGTGATCAGGTCTTCAGCAGGCTGCTGAATGACCGCATCATTTTCCTCGG
GCAGGAAGTCGACGACGAGATCGCAAACAAGATCACCGCGCAGTTGCTGATGCTTGCGGCGGAATCCGAGAACGACATCT
ACCTTTACATCAATTCTCCCGGCGGTTCGATCACGGCGGGCATGGCCGTCTACGACACGATGAACTACATCAAGAACGAT
GTGGTCACCATCGCCATGGGCTTCTGCGCTTCCATGGGGCAGTTCCTGCTCACCGCGGGTGCCAAGGGCAAGCGTTTCGC
GCTGCCGCACACGAAGATCCTCATGCACCAGCCCTCCGCGGGGCTCGCCGGCACCGCCTCCGACGTGCGGATCTACGCGG
ACCAACTGCTCAAGACCAAGCGGGAGATGGCCGAGCTCATCGCGGCGAACTCCGGCAACAGCGTCGAGACGATCACCAAG
GACTCTGACCGCGACCGGTGGTTCACCGCGGAAGAGGCCCGGCAGTACGGACTCATCGACAAGGTCATGACCTCCACCGG
GGACGCTCCTGGCGGCGGCGGCACCGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
53.977 |
89.796 |
0.485 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
54.023 |
88.776 |
0.48 |
| clpP | Streptococcus mutans UA159 |
52.023 |
88.265 |
0.459 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
51.445 |
88.265 |
0.454 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.867 |
88.265 |
0.449 |
| clpP | Streptococcus pneumoniae D39 |
49.711 |
88.265 |
0.439 |
| clpP | Streptococcus pneumoniae Rx1 |
49.711 |
88.265 |
0.439 |
| clpP | Streptococcus pneumoniae R6 |
49.711 |
88.265 |
0.439 |
| clpP | Streptococcus pneumoniae TIGR4 |
49.711 |
88.265 |
0.439 |
| clpP | Streptococcus pyogenes JRS4 |
48.555 |
88.265 |
0.429 |
| clpP | Streptococcus pyogenes MGAS315 |
48.555 |
88.265 |
0.429 |
| clpP | Streptococcus thermophilus LMG 18311 |
48 |
89.286 |
0.429 |
| clpP | Streptococcus thermophilus LMD-9 |
48 |
89.286 |
0.429 |