Detailed information NTG0397181

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: GH774_RS03890
• Genome accession: NZ_CP045789
• Coordinates: 730766..731725 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CFSAN032806
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 725766..736725

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH774_RS03870 (GH774_03870)	neuC	726333..727448 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
GH774_RS09960	-	727445..728311 (+)	867	Protein_754	beta-1,4-N-acetylgalactosaminyltransferase	-
GH774_RS09965	-	728393..729055 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
GH774_RS03880 (GH774_03880)	-	729050..729899 (-)	850	Protein_756	glycosyltransferase	-
GH774_RS03885 (GH774_03885)	waaV	729883..730707 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
GH774_RS03890 (GH774_03890)	waaF	730766..731725 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
GH774_RS03895 (GH774_03895)	gmhA	731706..732266 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
GH774_RS03900 (GH774_03900)	rfaE1	732263..733648 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
GH774_RS03905 (GH774_03905)	rfaD	733641..734594 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
GH774_RS03910 (GH774_03910)	gmhB	734591..735155 (-)	565	Protein_762	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
GH774_RS03915 (GH774_03915)	-	735236..735538 (+)	303	WP_002852762.1	cytochrome c	-
GH774_RS03920 (GH774_03920)	ccoS	735561..735767 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=397181 GH774_RS03890 WP_002875425.1 730766..731725(+) (waaF) [Campylobacter jejuni strain CFSAN032806]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=397181 GH774_RS03890 WP_002875425.1 730766..731725(+) (waaF) [Campylobacter jejuni strain CFSAN032806]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1