Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | GH774_RS03545 | Genome accession | NZ_CP045789 |
| Coordinates | 660596..660898 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain CFSAN032806 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 655596..665898
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH774_RS03520 (GH774_03520) | rpsR | 655958..656218 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| GH774_RS03525 (GH774_03525) | lon | 656279..658654 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| GH774_RS03530 (GH774_03530) | - | 658671..659318 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| GH774_RS03535 (GH774_03535) | fliW | 659479..659868 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| GH774_RS03540 (GH774_03540) | proC | 659868..660599 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| GH774_RS03545 (GH774_03545) | ctsT | 660596..660898 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| GH774_RS03550 (GH774_03550) | - | 660895..661557 (+) | 663 | WP_057036688.1 | hypothetical protein | - |
| GH774_RS03555 (GH774_03555) | - | 661554..662006 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| GH774_RS03560 (GH774_03560) | hemD | 662003..662632 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| GH774_RS03565 (GH774_03565) | thiE | 662610..663242 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| GH774_RS03570 (GH774_03570) | thiD | 663232..664044 (-) | 813 | WP_002868633.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| GH774_RS03575 (GH774_03575) | - | 664041..664727 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| GH774_RS03580 (GH774_03580) | - | 664724..665485 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=397179 GH774_RS03545 WP_002853046.1 660596..660898(+) (ctsT) [Campylobacter jejuni strain CFSAN032806]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=397179 GH774_RS03545 WP_002853046.1 660596..660898(+) (ctsT) [Campylobacter jejuni strain CFSAN032806]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |