Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   FOC63_RS08460 Genome accession   NZ_CP054015
Coordinates   1671874..1672356 (+) Length   160 a.a.
NCBI ID   WP_009853947.1    Uniprot ID   -
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1666874..1677356
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS08435 (FOC63_08435) - 1667535..1668323 (+) 789 WP_009853943.1 Nif3-like dinuclear metal center hexameric protein -
  FOC63_RS08440 (FOC63_08440) rfbA 1668510..1669379 (+) 870 WP_009853944.1 glucose-1-phosphate thymidylyltransferase RfbA -
  FOC63_RS08445 (FOC63_08445) - 1669379..1669972 (+) 594 WP_009853945.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  FOC63_RS08450 (FOC63_08450) rfbB 1670145..1671194 (+) 1050 WP_003064218.1 dTDP-glucose 4,6-dehydratase -
  FOC63_RS08455 (FOC63_08455) - 1671332..1671754 (+) 423 WP_043878546.1 HD domain-containing protein -
  FOC63_RS08460 (FOC63_08460) mutX 1671874..1672356 (+) 483 WP_009853947.1 NUDIX hydrolase Machinery gene
  FOC63_RS08465 (FOC63_08465) - 1672449..1673636 (+) 1188 WP_009853948.1 AI-2E family transporter -
  FOC63_RS08470 (FOC63_08470) - 1673626..1674861 (+) 1236 WP_009853949.1 tetratricopeptide repeat protein -
  FOC63_RS08475 (FOC63_08475) - 1674845..1675021 (+) 177 WP_009853950.1 hypothetical protein -
  FOC63_RS08480 (FOC63_08480) - 1675143..1675445 (+) 303 WP_009853951.1 ArsR/SmtB family transcription factor -
  FOC63_RS08485 (FOC63_08485) - 1675545..1676732 (+) 1188 WP_009853952.1 NADH-dependent flavin oxidoreductase -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18782.02 Da        Isoelectric Point: 4.2866

>NTDB_id=397159 FOC63_RS08460 WP_009853947.1 1671874..1672356(+) (mutX) [Streptococcus gallolyticus strain FDAARGOS_755]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDQVLSKPTWEGDYEIFKWILDDVPFFSAKFNYDDEQRLIDKSVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=397159 FOC63_RS08460 WP_009853947.1 1671874..1672356(+) (mutX) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGACAAAATTAGCAACGATTTGTTATATTGATAATGGTGAAGCGCTTTTGCTTTTACATCGCAATAAGAAACCAAATGA
TGTTCACGAAGGAAAATGGATTTCTGTTGGTGGTAAGCTAGAAGCAGGCGAGACACCAGATGAATGTGCGAAACGTGAGA
TTTTCGAGGAAACGCATTTTACTGTTAAAGAAATGGATTTCAAGGGAGTGATTACGTTCCCAGAATTCACACCAGGGCAT
GATTGGTACACTTATGTTTTCAAGGTAACCGATTTTGAGGGAGAATTGATTTCTGATGAAGAGTCACGTGAAGGAACTTT
AGAGTGGGTGCCTTACGACCAAGTTCTATCAAAACCGACTTGGGAGGGTGACTACGAAATTTTTAAATGGATTTTGGATG
ATGTGCCATTCTTTTCAGCCAAATTTAATTATGACGACGAACAGCGCTTGATTGATAAAAGCGTGACATTTTATGATAAA
TGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.811

99.375

0.694