Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   FOC63_RS04185 Genome accession   NZ_CP054015
Coordinates   836139..836894 (+) Length   251 a.a.
NCBI ID   WP_009853183.1    Uniprot ID   A0A1I7JAI7
Organism   Streptococcus gallolyticus strain FDAARGOS_755     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 831139..841894
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC63_RS04165 (FOC63_04165) mreD 831721..832176 (+) 456 WP_420822905.1 rod shape-determining protein MreD -
  FOC63_RS04170 (FOC63_04170) - 832278..833660 (+) 1383 WP_009853181.1 PcsB-like coiled-coil domain-containing protein -
  FOC63_RS04175 (FOC63_04175) - 833803..834771 (+) 969 WP_003062784.1 ribose-phosphate diphosphokinase -
  FOC63_RS04180 (FOC63_04180) - 834974..836149 (+) 1176 WP_009853182.1 pyridoxal phosphate-dependent aminotransferase -
  FOC63_RS04185 (FOC63_04185) recO 836139..836894 (+) 756 WP_009853183.1 DNA repair protein RecO Machinery gene
  FOC63_RS04190 (FOC63_04190) plsX 837066..838061 (+) 996 WP_012961315.1 phosphate acyltransferase PlsX -
  FOC63_RS04195 (FOC63_04195) - 838078..838320 (+) 243 WP_009853185.1 acyl carrier protein -
  FOC63_RS04200 (FOC63_04200) purC 838445..839155 (+) 711 WP_009853186.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 29160.50 Da        Isoelectric Point: 6.4977

>NTDB_id=397108 FOC63_RS04185 WP_009853183.1 836139..836894(+) (recO) [Streptococcus gallolyticus strain FDAARGOS_755]
MQTKETYGLVLYNRNYREDDKLVKIFTETNGKHMFFVKHAGKSRFNSVIQPLTVAKFILKINDTGLSFIEDYKEVDSFKE
INADLFKLSYASYVTALADAAVPDGVADPQLFAFVNKTLSLMEEGLDYEILTNIFEIQLLERFGVSLNFHECAFCHRVGL
PFDFSHKYSGLLCPEHYGKDDYRSHLDPNVLYLVDRFQAIHFDELKTISVKPEMKRKLRLFIDDIYDNYVGLRLKSKKFI
DDLGTWGNIMK

Nucleotide


Download         Length: 756 bp        

>NTDB_id=397108 FOC63_RS04185 WP_009853183.1 836139..836894(+) (recO) [Streptococcus gallolyticus strain FDAARGOS_755]
ATGCAAACTAAGGAAACTTATGGTCTTGTCCTCTATAATCGTAATTATCGTGAGGATGATAAGCTAGTCAAAATTTTTAC
AGAAACCAATGGAAAGCATATGTTTTTTGTTAAACATGCTGGTAAATCTCGGTTTAATTCTGTTATTCAGCCGTTAACGG
TGGCAAAATTTATTTTAAAAATTAATGATACAGGTCTGTCTTTCATTGAAGATTATAAGGAAGTTGACTCTTTTAAGGAA
ATTAATGCAGATTTGTTTAAGTTGTCCTATGCTTCTTATGTGACAGCATTGGCGGATGCAGCTGTGCCAGATGGTGTGGC
AGACCCGCAGTTGTTTGCATTTGTTAATAAGACGCTTTCCTTAATGGAAGAGGGACTTGACTACGAAATTTTGACTAATA
TTTTTGAGATTCAACTTTTAGAACGATTTGGTGTTAGTCTTAATTTTCATGAGTGTGCTTTTTGTCATCGGGTTGGATTG
CCCTTTGACTTTTCGCACAAATATTCTGGTCTGCTTTGTCCAGAGCATTATGGTAAAGATGATTATCGTAGTCATCTTGA
TCCGAATGTGCTGTACCTGGTGGACCGATTTCAAGCCATTCATTTTGATGAATTAAAGACGATTTCAGTTAAGCCTGAGA
TGAAACGAAAATTGCGTTTATTTATTGATGATATTTATGATAATTATGTCGGTCTTCGTTTGAAAAGTAAAAAATTCATT
GATGATTTAGGGACTTGGGGAAATATTATGAAATAA

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(84-237)

Recombination protein O N terminal (RecO_N)

(1-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1I7JAI7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.347

100

0.633