Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   FOC71_RS09360 Genome accession   NZ_CP053999
Coordinates   1846707..1847165 (-) Length   152 a.a.
NCBI ID   WP_003074423.1    Uniprot ID   A0A380L5S7
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1841707..1852165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS09345 (FOC71_09345) - 1842679..1843113 (-) 435 WP_003074429.1 cupin domain-containing protein -
  FOC71_RS09350 (FOC71_09350) rcrQ 1843198..1844958 (-) 1761 WP_003074427.1 ABC transporter ATP-binding protein Regulator
  FOC71_RS09355 (FOC71_09355) rcrP 1844948..1846714 (-) 1767 WP_003074425.1 ABC transporter ATP-binding protein Regulator
  FOC71_RS09360 (FOC71_09360) rcrR 1846707..1847165 (-) 459 WP_003074423.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  FOC71_RS09365 (FOC71_09365) - 1847337..1848524 (-) 1188 WP_003074421.1 NADH-dependent flavin oxidoreductase -
  FOC71_RS09370 (FOC71_09370) - 1848790..1849200 (-) 411 WP_003074419.1 peptide deformylase -
  FOC71_RS09375 (FOC71_09375) scrK 1849266..1850165 (-) 900 WP_003074417.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17709.68 Da        Isoelectric Point: 9.0561

>NTDB_id=397063 FOC71_RS09360 WP_003074423.1 1846707..1847165(-) (rcrR) [Streptococcus intermedius strain FDAARGOS_769]
MEKPLLEFKRFGRKTHLMIQKIAKERGIEFMAGPQGQVLHFVNHREDCGKMTFIKDIEQELGITKSVASNLMKRMVKNGL
IYLEVSEADKRAKIIRLTSESKERMNKIRDFFDEMDRCLLTGISEEDLVTFFQVMGKFYQNIEKLEKGEANG

Nucleotide


Download         Length: 459 bp        

>NTDB_id=397063 FOC71_RS09360 WP_003074423.1 1846707..1847165(-) (rcrR) [Streptococcus intermedius strain FDAARGOS_769]
ATGGAAAAACCATTATTGGAATTCAAGCGATTTGGACGGAAGACACATCTGATGATTCAAAAAATTGCTAAAGAGCGAGG
GATTGAATTTATGGCGGGTCCACAAGGGCAAGTATTGCATTTTGTGAATCACCGAGAAGATTGTGGCAAGATGACCTTTA
TTAAAGATATTGAGCAGGAGTTGGGAATTACCAAGTCAGTTGCTAGTAACTTAATGAAGCGAATGGTTAAAAATGGCCTG
ATTTATTTGGAAGTGAGTGAAGCAGATAAACGCGCTAAGATTATTCGTTTGACATCAGAATCAAAAGAGCGCATGAATAA
AATTCGGGATTTCTTTGATGAGATGGATCGCTGCTTATTGACTGGCATTTCAGAAGAAGATTTGGTGACTTTTTTTCAGG
TAATGGGAAAATTTTACCAGAATATTGAAAAATTAGAAAAAGGAGAAGCGAATGGTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-92)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380L5S7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.151

96.053

0.414

Multiple sequence alignment