Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GH772_RS09320 | Genome accession | NZ_CP045777 |
| Coordinates | 1548461..1549504 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013206.1 | Uniprot ID | - |
| Organism | Bacillus paranthracis strain CFSAN068816 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1543461..1554504
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH772_RS09285 (GH772_09165) | - | 1543714..1544202 (+) | 489 | WP_000764271.1 | hypothetical protein | - |
| GH772_RS09290 (GH772_09170) | - | 1544239..1544550 (-) | 312 | WP_001093243.1 | hypothetical protein | - |
| GH772_RS09295 (GH772_09175) | - | 1544805..1545020 (+) | 216 | WP_001008331.1 | DUF3912 family protein | - |
| GH772_RS09300 (GH772_09180) | - | 1545108..1545515 (+) | 408 | WP_000877911.1 | hypothetical protein | - |
| GH772_RS09305 (GH772_09185) | - | 1545690..1547084 (-) | 1395 | WP_001094339.1 | L-cystine transporter | - |
| GH772_RS09310 (GH772_09190) | - | 1547192..1547434 (-) | 243 | WP_000440719.1 | DUF2626 domain-containing protein | - |
| GH772_RS09315 (GH772_09195) | - | 1547560..1548255 (-) | 696 | WP_000434105.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GH772_RS09320 (GH772_09200) | comGA | 1548461..1549504 (+) | 1044 | WP_001013206.1 | competence protein ComGA | Machinery gene |
| GH772_RS09325 (GH772_09205) | comGB | 1549497..1550528 (+) | 1032 | WP_000473553.1 | competence type IV pilus assembly protein ComGB | - |
| GH772_RS09330 (GH772_09210) | comGC | 1550540..1550839 (+) | 300 | WP_001178694.1 | competence type IV pilus major pilin ComGC | - |
| GH772_RS09335 (GH772_09215) | comGD | 1550836..1551291 (+) | 456 | WP_000810387.1 | comG operon protein ComGD | - |
| GH772_RS09340 (GH772_09220) | comGE | 1551284..1551586 (+) | 303 | WP_000829518.1 | competence type IV pilus minor pilin ComGE | - |
| GH772_RS29415 | - | 1551556..1551744 (+) | 189 | Protein_1511 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| GH772_RS09345 (GH772_09225) | - | 1551887..1553056 (-) | 1170 | WP_000190217.1 | site-specific integrase | - |
| GH772_RS09350 (GH772_09230) | - | 1553261..1553608 (-) | 348 | WP_000859168.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39361.84 Da Isoelectric Point: 9.1826
>NTDB_id=397060 GH772_RS09320 WP_001013206.1 1548461..1549504(+) (comGA) [Bacillus paranthracis strain CFSAN068816]
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
MNGIESFANTILKEACRVQASDLHIVPRKKDVVIQLRIGKDLMTKQYIEKEFGEKLVSHFKFLASMDIGERRKPQNGSLY
LQMDGQEVYLRLSTLPTVYQESLVIRLHLQASIQPLSHLSLFPSTAKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIVTLEDPVEKRNDDVLQIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAILRFMDFGITRQEIEQSLLAIAAQRLVELKCPFCKRKCSTVCKSMRQVRQASIYELLYGYELKQAIKEANGEC
VTYKHETLESSLRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=397060 GH772_RS09320 WP_001013206.1 1548461..1549504(+) (comGA) [Bacillus paranthracis strain CFSAN068816]
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
ATGAATGGAATTGAAAGCTTTGCGAATACGATTTTGAAAGAGGCGTGTAGGGTACAAGCTTCGGATTTACATATTGTGCC
CCGGAAGAAGGATGTAGTGATTCAACTACGCATAGGGAAAGATTTAATGACGAAACAATACATTGAAAAGGAATTTGGAG
AAAAACTTGTTTCACACTTTAAATTTTTAGCATCCATGGATATAGGGGAGAGGCGGAAGCCACAAAATGGTTCACTGTAT
TTACAAATGGATGGACAGGAAGTGTATTTACGTCTTTCCACGCTTCCAACTGTATATCAAGAAAGTCTCGTTATTCGTCT
TCATTTACAAGCATCTATTCAGCCGTTATCTCATCTTTCGTTATTTCCAAGTACAGCGAAGAAACTACTTTCTTTTTTAC
ATTATTCCCATGGGTTACTCGTATTTACTGGACCGACTGGATCGGGGAAGACAACAACAATGTATGCATTATTAGAGGTA
ATTAGAAAAAAGAAAACACGCCGCATCGTTACACTGGAAGATCCAGTTGAAAAAAGAAATGACGATGTATTACAAATTCA
AATAAATGAAAAAGCAGGTATCACATATGAGGCGGGACTAAAGGCTATTTTGCGTCATGATCCAGATGTTATTTTAGTGG
GTGAAATTCGTGATGAAGAAACAGCAAAAATCGCTATAAGAGCAAGTTTGACTGGCCATTTAGTAATGACGACACTGCAT
ACGAATGATGCGAAAGGAGCAATACTTCGGTTTATGGACTTTGGCATAACAAGGCAAGAGATTGAACAATCTTTATTGGC
TATAGCTGCACAGCGACTTGTTGAATTGAAGTGTCCGTTTTGTAAAAGAAAGTGCTCAACTGTATGTAAATCAATGAGGC
AAGTAAGGCAAGCGAGTATTTATGAGTTGTTATATGGATATGAGTTAAAACAAGCGATTAAAGAAGCAAACGGGGAATGT
GTCACGTACAAGCATGAGACATTAGAGTCTTCGTTGCGAAAAGGATACGCTTTAGGATTTTTAGAAGAGGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.501 |
100 |
0.585 |
| pilB | Vibrio campbellii strain DS40M4 |
35.977 |
100 |
0.366 |