Detailed information NTG0397050

Bioinformatically predicted

Overview

• Name: rexA
• Type: Machinery gene
• Locus tag: FOC71_RS08305
• Genome accession: NZ_CP053999
• Coordinates: 1637556..1641236 (-)
• Length: 1226 a.a.
• NCBI ID: WP_003072129.1
• Uniprot ID: -
• Organism: Streptococcus intermedius strain FDAARGOS_769
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1632556..1646236

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOC71_RS08290 (FOC71_08290)	glgD	1632856..1633995 (-)	1140	WP_003072135.1	glucose-1-phosphate adenylyltransferase subunit GlgD	-
FOC71_RS08295 (FOC71_08295)	-	1633985..1635127 (-)	1143	WP_003072133.1	glucose-1-phosphate adenylyltransferase	-
FOC71_RS08300 (FOC71_08300)	glgB	1635131..1637041 (-)	1911	WP_003072132.1	1,4-alpha-glucan branching protein GlgB	-
FOC71_RS08305 (FOC71_08305)	rexA	1637556..1641236 (-)	3681	WP_003072129.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
FOC71_RS08310 (FOC71_08310)	rexB	1641233..1644505 (-)	3273	WP_003072127.1	ATP-dependent nuclease subunit B	Machinery gene
FOC71_RS08315 (FOC71_08315)	-	1644627..1645841 (-)	1215	WP_003072125.1	ABC transporter permease	-

Sequence

Protein

• Length: 1226 a.a.
• Molecular weight: 141582.50 Da
• Isoelectric Point: 5.9684

>NTDB_id=397050 FOC71_RS08305 WP_003072129.1 1637556..1641236(-) (rexA) [Streptococcus intermedius strain FDAARGOS_769]
MKRLPFLNQAEICALQHQEAQSNKTQKRTAEQIEAIYSSGQNILVSASAGSGKTFVMVQRIIDQIMRGVRIEQLFISTFT
VKAASELKERLEKELSKALKETTNEELKQHLAQQLADIPNADIGTMDSFTQKVLNKYGYLLELAPNFRILQSTSEQLLLQ
NEVFEQVFEDFYQSDQAALFKKMVKNFTGQRKDLYGFREQVYKIYSFLQSTSNPIEWLEKDFLKGYEFVDFQEEKAQLLT
KTKEALFDLEDFFRYHLIHEAKEFPKAKYLENVQRVLDGLASLQGYSSEEVYLTALNHIVEISRASNGKALTNSGRKEEL
KEIINAYNEKRKEKIQVLRDLADQFYRFEFQMTYHEEAKEILLVLQQFMKSFVTSYLNRKKEENAFEFADISHFAIQILE
ECSDVRQFYRNKYHEVMVDEYQDTNHTQERMLELLSNGDNRFMVGDIKQSIYRFRQADPQIFNEKFKTYKEDSRQGKLIV
LKENFRSHLEVLEATNDVFKRLMDEEVGEIDYNETHYLVAGNPDKKEPNPLYQTEFLIYDGALEADKEENDKEVSSVSAG
EVELVIKEIIRLYNEENVQFEDITLLTASRTRNDVILAEFAKYGIPVVSDGGEDNYLQSVEVMVMLDTLRTINNPLNDYA
LVALLKSPMFNFTEDELARLALQKKVTETNYVVHQENLYEKLKNARNGYGQYPELITPPLLKKIQQFQGTLQAWREYAKT
NSLYDLLWKIYQDRFYYDYVGALPNGAGRQANLYALTLRANDYEKMSFKGLSRFIGMIDKILETQNDLASVVSAAPKHAV
RLMTVHKSKGLEFKYVFLLNMDKVFNRKDSSSALILSRQNGVGIKYVADVAVDVADKLAPNHVRLSIDTLPYEQNEREIH
LASISEQMRLLYVAMTRAERKLYLVGKGHQNSLEKKSFPTPVKGHLAASIRQSMTSFQDWMWALHVVFEKDNLAFSTRFV
TDNDLTSEKIGQLKLKDAVIEEDLIDNRQSEDIRRALDILENVDRLNTQYRAAIHLPSVQTPSQIKKFYEPVIDTDGVEI
MEKRNPTIVGKASFELPNFAKKAPVTGAQIGSAVHELMQRIPLDQAPTIAILRKVLKQVQAEASVKKKIDLQKIASFFGT
ELGQLLLKYTDRVYREAPFAMLKQDPASGQDFVVRGILDGYLLLADRIILFDYKTDQYTHSSELVKRYQGQLALYAEALR
RSYGIEKIEKYLVLLGESQLQVVKVD

Nucleotide

• Length: 3681 bp

>NTDB_id=397050 FOC71_RS08305 WP_003072129.1 1637556..1641236(-) (rexA) [Streptococcus intermedius strain FDAARGOS_769]
ATGAAGAGACTACCATTTTTGAATCAAGCAGAAATTTGTGCTTTGCAGCATCAAGAAGCACAGTCTAATAAAACTCAAAA
ACGTACAGCAGAGCAAATCGAAGCTATCTACTCCTCTGGTCAAAACATTCTTGTGTCTGCTTCTGCAGGATCAGGAAAAA
CTTTTGTAATGGTGCAGCGGATTATTGATCAAATTATGCGGGGAGTTCGTATTGAGCAGCTCTTCATTTCAACTTTCACC
GTCAAAGCAGCTAGTGAATTAAAAGAGCGCTTGGAGAAAGAGTTGTCCAAGGCCTTGAAAGAAACAACTAATGAGGAACT
TAAACAGCACTTGGCGCAGCAATTAGCTGATATTCCCAATGCAGATATTGGAACTATGGACTCTTTCACTCAAAAAGTCC
TAAATAAATATGGTTATCTGTTGGAGTTGGCACCAAATTTTCGCATTTTACAAAGTACGAGTGAACAATTATTGCTACAA
AACGAAGTTTTTGAGCAAGTTTTTGAAGACTTCTATCAATCTGATCAGGCAGCTTTGTTTAAAAAAATGGTCAAAAACTT
TACAGGTCAGAGGAAAGATTTGTATGGTTTCCGAGAGCAGGTTTATAAGATTTATTCTTTTTTGCAGTCTACTAGTAATC
CAATAGAATGGTTGGAAAAAGACTTTTTGAAAGGCTATGAGTTTGTAGATTTCCAAGAAGAGAAAGCACAACTCTTAACG
AAGACTAAAGAAGCCCTCTTTGATTTAGAAGATTTTTTCCGTTATCATTTGATCCATGAAGCCAAGGAATTTCCCAAAGC
AAAATATCTTGAAAATGTGCAGCGTGTGCTTGATGGGCTTGCAAGTTTACAAGGGTATTCCTCTGAGGAAGTCTATCTCA
CAGCGCTCAATCATATTGTAGAAATATCGCGTGCCAGCAATGGAAAAGCCTTGACGAACAGCGGTCGTAAAGAAGAATTA
AAAGAAATCATCAACGCCTATAACGAAAAACGCAAAGAAAAAATTCAAGTTCTACGAGACTTGGCGGATCAATTTTATCG
TTTTGAATTTCAAATGACCTACCATGAGGAAGCAAAAGAAATTTTGCTTGTTTTGCAACAATTTATGAAATCGTTTGTTA
CAAGCTATTTGAATCGCAAAAAAGAAGAAAATGCTTTTGAATTTGCAGACATTAGTCATTTTGCTATTCAGATTTTAGAA
GAATGTTCGGATGTGCGTCAGTTTTATAGGAACAAATACCATGAAGTTATGGTAGATGAATATCAAGATACTAACCACAC
GCAAGAGCGGATGCTAGAACTGTTATCAAATGGGGATAATCGCTTTATGGTGGGGGATATTAAACAGTCTATTTACCGTT
TTCGTCAAGCGGATCCGCAGATTTTCAATGAGAAATTCAAAACCTATAAAGAAGATAGTAGACAAGGGAAATTGATTGTC
TTAAAAGAGAATTTTCGCAGTCATTTGGAAGTCTTGGAAGCCACCAATGATGTGTTTAAGCGCCTCATGGATGAGGAAGT
GGGAGAAATTGATTACAATGAAACGCATTATCTGGTCGCTGGAAATCCTGATAAAAAAGAACCAAATCCCTTGTATCAGA
CAGAATTTCTCATTTATGATGGAGCGCTTGAAGCGGATAAGGAGGAGAATGACAAGGAGGTTTCTTCTGTTTCTGCAGGA
GAAGTAGAACTGGTGATTAAAGAAATTATTCGCCTGTACAATGAAGAAAATGTCCAATTTGAGGATATTACTTTGCTAAC
GGCTTCGCGGACGCGCAACGATGTGATTTTAGCTGAATTTGCTAAATATGGTATTCCTGTCGTTTCAGACGGTGGTGAGG
ACAATTACCTTCAGTCTGTTGAAGTCATGGTGATGTTAGACACCTTGCGTACAATTAACAACCCTCTCAATGATTATGCT
TTAGTAGCGCTTTTAAAATCGCCAATGTTTAACTTTACAGAAGATGAATTGGCACGTTTAGCTTTGCAAAAGAAGGTGAC
TGAGACAAATTATGTTGTCCATCAGGAAAATCTCTATGAGAAGTTGAAGAATGCTCGGAATGGGTACGGGCAATATCCTG
AACTTATCACGCCTCCTCTTTTAAAAAAAATCCAGCAATTTCAAGGAACACTACAGGCTTGGCGAGAGTATGCAAAAACA
AATTCACTATATGATTTGCTTTGGAAAATTTATCAAGATCGCTTTTATTACGATTATGTGGGAGCTTTACCAAATGGAGC
GGGACGTCAGGCCAATCTTTATGCACTGACCTTACGAGCAAATGATTACGAAAAAATGAGTTTTAAAGGCTTGTCACGTT
TTATTGGGATGATTGATAAAATCTTGGAAACACAGAATGATTTAGCCAGTGTAGTCAGTGCAGCTCCGAAACATGCGGTT
CGCCTGATGACGGTTCATAAGAGCAAAGGTTTGGAATTTAAATATGTCTTTTTGCTCAATATGGACAAAGTATTTAATCG
TAAAGATAGCAGTTCTGCTTTGATTCTCAGTCGTCAAAATGGTGTTGGAATCAAGTATGTGGCTGATGTAGCAGTAGATG
TTGCTGATAAGTTAGCTCCAAACCATGTTCGTTTGTCTATTGATACTCTGCCTTATGAGCAAAATGAACGTGAGATCCAT
TTAGCCAGCATTTCGGAACAAATGCGTCTACTCTATGTTGCCATGACACGGGCTGAAAGGAAACTGTATTTAGTTGGTAA
AGGTCATCAGAACAGTTTGGAGAAAAAAAGCTTCCCTACTCCAGTGAAGGGGCATTTAGCTGCATCTATCAGGCAAAGTA
TGACAAGTTTTCAAGATTGGATGTGGGCTTTACATGTAGTATTTGAGAAAGATAATCTAGCTTTTTCAACGCGATTTGTG
ACAGATAATGACTTGACAAGTGAAAAAATAGGTCAACTGAAATTGAAAGATGCGGTTATTGAAGAGGATTTAATAGACAA
TCGCCAATCTGAGGATATTCGCAGGGCTTTGGATATTTTGGAAAATGTAGATCGACTGAATACTCAGTATCGAGCTGCCA
TTCATCTACCGAGTGTTCAAACACCAAGCCAAATCAAGAAATTTTATGAACCAGTTATAGATACAGATGGCGTTGAAATT
ATGGAGAAAAGGAATCCGACCATTGTAGGAAAAGCTTCTTTTGAGCTACCAAATTTTGCTAAAAAAGCTCCAGTTACAGG
AGCGCAAATTGGTAGCGCCGTCCATGAACTGATGCAGCGTATTCCTTTGGATCAAGCCCCTACGATAGCTATTTTGAGAA
AAGTTTTAAAACAGGTTCAGGCAGAAGCAAGTGTTAAAAAGAAAATTGATTTGCAAAAGATAGCTAGTTTCTTTGGGACT
GAACTTGGACAGCTCCTTTTGAAGTATACAGACAGAGTATATCGTGAAGCCCCTTTTGCTATGTTAAAGCAGGATCCAGC
AAGTGGACAAGATTTTGTTGTTCGTGGGATATTAGATGGCTATCTTCTATTAGCTGACCGAATTATTCTCTTTGACTATA
AAACGGATCAATACACTCATTCAAGTGAATTAGTCAAACGATACCAAGGGCAATTAGCACTTTATGCCGAAGCTCTTAGG
CGTTCATATGGTATTGAAAAAATTGAAAAATACCTAGTGCTACTAGGTGAATCTCAACTTCAAGTAGTCAAGGTGGATTA
G

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (1068-1204)

• UvrD/REP helicase N-terminal domain (UvrD-helicase) (29-469)

• UvrD-like helicase C-terminal domain (UvrD_C) (479-904)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexA	Streptococcus pneumoniae R6	60.49	99.918	0.604