Detailed information NTG0397049

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: GH772_RS04595
• Genome accession: NZ_CP045777
• Coordinates: 661088..662437 (+)
• Length: 449 a.a.
• NCBI ID: WP_000900493.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain CFSAN068816
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 656088..667437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH772_RS04575 (GH772_04495)	-	657151..657786 (-)	636	WP_000926695.1	YigZ family protein	-
GH772_RS04580 (GH772_04500)	-	658026..658868 (+)	843	WP_000844764.1	DegV family protein	-
GH772_RS04585 (GH772_04505)	-	659042..659356 (+)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
GH772_RS04590 (GH772_04510)	-	659504..660961 (+)	1458	WP_000499503.1	NlpC/P60 family protein	-
GH772_RS04595 (GH772_04515)	comFA	661088..662437 (+)	1350	WP_000900493.1	ATP-dependent helicase ComFA	Machinery gene
GH772_RS04600 (GH772_04520)	-	662437..663141 (+)	705	WP_002028884.1	ComF family protein	-
GH772_RS04605 (GH772_04525)	cspC	663268..663465 (+)	198	WP_001162041.1	cold shock protein CspC	-
GH772_RS04610 (GH772_04530)	hpf	663786..664328 (+)	543	WP_000671191.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
GH772_RS04615 (GH772_04535)	secA	664604..667111 (+)	2508	WP_000579382.1	preprotein translocase subunit SecA	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51011.49 Da
• Isoelectric Point: 9.7406

>NTDB_id=397049 GH772_RS04595 WP_000900493.1 661088..662437(+) (comFA) [Bacillus paranthracis strain CFSAN068816]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=397049 GH772_RS04595 WP_000900493.1 661088..662437(+) (comFA) [Bacillus paranthracis strain CFSAN068816]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361