Detailed information NTG0397043

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GH772_RS03000
• Genome accession: NZ_CP045777
• Coordinates: 318401..319528 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470750.1
• Uniprot ID: A0A2C3GXQ0
• Organism: Bacillus paranthracis strain CFSAN068816
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 313401..324528

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GH772_RS02990 (GH772_02920)	gyrA	313880..316351 (-)	2472	WP_001282850.1	DNA gyrase subunit A	-
GH772_RS02995 (GH772_02925)	gyrB	316440..318362 (-)	1923	WP_000435993.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
GH772_RS03000 (GH772_02930)	recF	318401..319528 (-)	1128	WP_000470750.1	DNA replication/repair protein RecF	Machinery gene
GH772_RS03005 (GH772_02935)	yaaA	319541..319753 (-)	213	WP_000821367.1	S4 domain-containing protein YaaA	-
GH772_RS03010 (GH772_02940)	dnaN	319881..321020 (-)	1140	WP_001212896.1	DNA polymerase III subunit beta	-
GH772_RS03015 (GH772_02945)	dnaA	321199..322539 (-)	1341	WP_000428025.1	chromosomal replication initiator protein DnaA	-
GH772_RS03020 (GH772_02950)	rpmH	323105..323239 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
GH772_RS03025 (GH772_02955)	rnpA	323316..323663 (+)	348	WP_000726629.1	ribonuclease P protein component	-
GH772_RS03030 (GH772_02960)	spoIIIJ	323716..324483 (+)	768	WP_000727745.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43334.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=397043 GH772_RS03000 WP_000470750.1 318401..319528(-) (recF) [Bacillus paranthracis strain CFSAN068816]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=397043 GH772_RS03000 WP_000470750.1 318401..319528(-) (recF) [Bacillus paranthracis strain CFSAN068816]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAGTTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAGAATGCGCAAGGGAAAACGAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAGCTTATCCGTTGGGATGAAGATTTCGGTCAAATTAAAGGAAAGCTACAAAAGAGAAATAGTTCT
TTGTCTTTGGAATTAAATATCTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAATTGAGTCAATA
TATTGGCGTGATGAATGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGCCAAATAGCTCCGGTCTATTTGTATGAATTGAGTCAATATCAAAAGGTGCTCACACAACGA
AATCACTTGCTAAAAAAGATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTTATTGA
GCATGGTACAAAAATTTTGCAAAAACGCTTTGAATTTTTGCATTTACTACAAGAATGGGCAGCTCCAATTCATCGTGGTA
TAAGCCGTGGGTTAGAAGAATTAGAAATTGTCTATAAACCGAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCCGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTGT
CCCTAAAATTAGCTGAAATTGAATTGATTTACTCAGAAGTTAAAGAATATCCGATTCTTCTATTGGATGATGTATTATCA
GAATTAGATGATTATCGTCAATCGCATCTGTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTGACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCGTAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

3D structure

• AlphaFold DB: A0A2C3GXQ0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.304	98.133	0.651