Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Regulator
Locus tag   FOC71_RS01865 Genome accession   NZ_CP053999
Coordinates   357496..357642 (-) Length   48 a.a.
NCBI ID   WP_003075491.1    Uniprot ID   O33651
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 352496..362642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS01840 (FOC71_01840) - 352505..355081 (+) 2577 WP_003075486.1 YfhO family protein -
  FOC71_RS01855 (FOC71_01855) comE 355405..356154 (-) 750 WP_003075488.1 competence system response regulator transcription factor ComE Regulator
  FOC71_RS01860 (FOC71_01860) comD/comD1 356154..357479 (-) 1326 WP_003075490.1 GHKL domain-containing protein Regulator
  FOC71_RS01865 (FOC71_01865) comC 357496..357642 (-) 147 WP_003075491.1 bacteriocin Regulator
  FOC71_RS01875 (FOC71_01875) rlmH 357919..358398 (-) 480 WP_003075493.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FOC71_RS01880 (FOC71_01880) htrA 358602..359792 (+) 1191 WP_003075495.1 trypsin-like peptidase domain-containing protein Regulator
  FOC71_RS01885 (FOC71_01885) spo0J 359847..360614 (+) 768 WP_003075496.1 ParB/RepB/Spo0J family partition protein Regulator
  FOC71_RS01890 (FOC71_01890) dnaA 360840..362183 (+) 1344 WP_003075498.1 chromosomal replication initiator protein DnaA -

Sequence

Protein


Download         Length: 48 a.a.        Molecular weight: 5605.69 Da        Isoelectric Point: 10.5532

>NTDB_id=396988 FOC71_RS01865 WP_003075491.1 357496..357642(-) (comC) [Streptococcus intermedius strain FDAARGOS_769]
MKKLFAKKEVVKKEVVKFKELNDEQLDKVIGGDSRIRMGFDFSKLFGK

Nucleotide


Download         Length: 147 bp        

>NTDB_id=396988 FOC71_RS01865 WP_003075491.1 357496..357642(-) (comC) [Streptococcus intermedius strain FDAARGOS_769]
ATGAAAAAGTTGTTTGCTAAAAAAGAGGTAGTAAAAAAGGAAGTTGTGAAATTTAAAGAGTTAAATGATGAACAGTTAGA
TAAAGTCATTGGTGGGGATAGTCGAATCAGAATGGGATTTGATTTTTCTAAACTTTTTGGTAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33651

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Streptococcus sinensis strain Forsyth1A

54.054

77.083

0.417