Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FOC73_RS07980 Genome accession   NZ_CP053998
Coordinates   1646199..1647986 (+) Length   595 a.a.
NCBI ID   WP_002886124.1    Uniprot ID   -
Organism   Streptococcus salivarius strain FDAARGOS_771     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1641199..1652986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC73_RS07960 (FOC73_07960) - 1641794..1643002 (+) 1209 WP_002886072.1 ABC transporter permease -
  FOC73_RS07965 (FOC73_07965) rplJ 1643294..1643797 (+) 504 WP_002886041.1 50S ribosomal protein L10 -
  FOC73_RS07970 (FOC73_07970) rplL 1643873..1644241 (+) 369 WP_002886110.1 50S ribosomal protein L7/L12 -
  FOC73_RS07975 (FOC73_07975) rcrP 1644450..1646186 (+) 1737 WP_002885969.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07980 (FOC73_07980) rcrQ 1646199..1647986 (+) 1788 WP_002886124.1 ABC transporter ATP-binding protein Regulator
  FOC73_RS07985 (FOC73_07985) queA 1648084..1649127 (-) 1044 WP_002886029.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  FOC73_RS07990 (FOC73_07990) - 1649278..1649979 (+) 702 WP_002885948.1 glucosamine-6-phosphate deaminase -
  FOC73_RS07995 (FOC73_07995) - 1650169..1651152 (+) 984 WP_002886090.1 rhodanese-related sulfurtransferase -
  FOC73_RS08000 (FOC73_08000) - 1651331..1651528 (+) 198 WP_002885991.1 helix-turn-helix transcriptional regulator -
  FOC73_RS08005 (FOC73_08005) - 1651542..1652036 (+) 495 WP_002885975.1 DUF6773 family protein -
  FOC73_RS08010 (FOC73_08010) - 1652115..1652885 (+) 771 WP_002885931.1 nucleoside phosphorylase -

Sequence

Protein


Download         Length: 595 a.a.        Molecular weight: 66358.65 Da        Isoelectric Point: 5.5359

>NTDB_id=396948 FOC73_RS07980 WP_002886124.1 1646199..1647986(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
MKKNKMKISHSSSFGRLWSYLQAYRFPLYLAIFLKIVSVIMSVLEPVVIGLAITELTKNTLAIIKGVEGAHINVSYVGLV
LVVYLLRGLIYELAAYYSNFFMTNAVQATVQDMRNEMTEKINRTSVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVV
NAVFTLALVIGTVLYLNLQLGAIVVITIPITFFGARFIMSKSQPYFKQQADALGTLNGFVQENLTGFNVLKLFGREDKSL
DDFKEITEDLQKVGFKANFISGLMMPVLNGLSDLTYLIVAVLGGLQVLAGRLTIGNMQAFVQYVWQINQPIQNLTQLAGQ
LQSAKSSLDRIFQLMDEPDEANDATEVLAGDLTGQVSFKHVDFQYVADKPLIRDFNLEVNPGEMVAIVGPTGAGKSTIIN
LLMRFYDVTAGSISVDGHDIRNLSRKDYRKQFGMVLQDAWLFEGTIKENLRFGNLEATDEEIVEAAKAANVDHFIRTLPG
GYNMEMNQESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKTLMQGRTSFVIAHRLSTIQEADKI
LVLKDGQIIEQGNHESLLADKGFYYDLYNSQFAEK

Nucleotide


Download         Length: 1788 bp        

>NTDB_id=396948 FOC73_RS07980 WP_002886124.1 1646199..1647986(+) (rcrQ) [Streptococcus salivarius strain FDAARGOS_771]
ATGAAGAAAAATAAAATGAAAATAAGTCATTCCTCAAGTTTTGGCCGCCTTTGGTCCTACTTGCAGGCTTATCGTTTCCC
ACTTTACCTAGCCATTTTCCTGAAAATTGTTAGTGTTATCATGAGTGTCCTTGAGCCAGTGGTCATTGGTTTAGCTATTA
CCGAGTTAACTAAAAATACGTTGGCCATCATCAAAGGTGTGGAAGGCGCTCATATCAACGTTTCCTATGTTGGTTTGGTT
TTGGTTGTTTATCTCTTGCGTGGTCTTATTTATGAGTTGGCCGCCTACTATTCCAACTTTTTCATGACCAATGCTGTGCA
AGCAACGGTTCAAGATATGCGAAATGAGATGACCGAGAAAATCAATCGTACCTCAGTGTCATACTTTGATAAGCACCAGT
TCGGGGACCTCTTGGGCCGCTTTACCAGTGACGTCGAGACAGTATCTAATGCCTTGCAACAGTCATTCTTGCAGGTTGTT
AATGCCGTCTTTACTCTAGCCTTGGTTATTGGAACAGTGCTTTACCTTAATCTTCAATTGGGAGCTATAGTTGTCATCAC
TATTCCGATTACATTCTTTGGTGCCCGCTTTATCATGAGTAAGTCTCAGCCCTACTTTAAACAACAGGCTGATGCTCTAG
GTACTCTTAATGGTTTTGTTCAGGAAAATCTGACTGGCTTCAATGTGCTTAAGCTATTTGGCCGTGAGGATAAATCCTTG
GATGATTTTAAAGAAATCACGGAAGACCTTCAGAAGGTAGGCTTTAAGGCTAATTTCATTTCAGGACTTATGATGCCGGT
TCTTAACGGTTTATCTGACTTGACCTATCTCATTGTTGCTGTTCTAGGTGGTTTGCAAGTCTTGGCTGGTCGCTTGACGA
TTGGTAATATGCAGGCCTTTGTTCAGTACGTTTGGCAGATTAACCAACCTATTCAGAACTTGACTCAGTTGGCTGGACAA
TTGCAGAGTGCTAAATCTTCTTTGGACCGTATTTTCCAACTGATGGATGAACCAGACGAGGCTAATGATGCTACTGAAGT
GCTTGCCGGAGATTTGACTGGCCAAGTTAGCTTTAAGCATGTGGACTTCCAGTATGTGGCTGATAAACCTTTGATTCGTG
ACTTTAATCTTGAGGTTAATCCTGGCGAAATGGTGGCCATTGTCGGTCCTACCGGTGCCGGAAAATCAACGATTATCAAT
CTTCTCATGCGTTTCTATGATGTGACTGCCGGGTCTATCTCGGTTGACGGTCATGATATCCGTAACCTGTCTCGTAAGGA
TTATCGTAAGCAGTTTGGTATGGTGCTTCAGGATGCTTGGCTTTTTGAAGGAACTATCAAGGAAAATCTTCGCTTTGGTA
ATCTTGAGGCAACTGACGAAGAAATTGTTGAAGCCGCTAAGGCTGCCAATGTGGATCACTTTATCCGTACTCTACCTGGT
GGTTACAACATGGAAATGAACCAGGAATCAAGTAATATCTCACTAGGACAAAAGCAACTTTTGACCATTGCGCGTGCGCT
TTTGGCTGATCCTAAAATTTTGATTTTGGACGAGGCAACCTCATCGGTTGATACTCGTCTGGAACTCTTGATTCAAAAAG
CCATGAAGACCCTCATGCAAGGTCGAACAAGCTTTGTCATTGCCCACCGTCTATCGACCATTCAAGAAGCAGACAAAATT
TTGGTCCTTAAAGATGGTCAAATCATCGAACAAGGGAACCATGAATCCCTCCTTGCAGATAAAGGTTTCTATTATGACTT
GTATAATAGTCAGTTTGCGGAGAAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(29-310)

ABC transporter (ABC_tran)

(373-521)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.301

99.328

0.42