Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxO   Type   Regulator
Locus tag   VVMO6_RS08140 Genome accession   NC_014965
Coordinates   1727940..1729433 (+) Length   497 a.a.
NCBI ID   WP_013571858.1    Uniprot ID   -
Organism   Vibrio vulnificus MO6-24/O     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1722940..1734433
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VVMO6_RS08125 (VVM_03127) - 1723964..1724656 (+) 693 WP_043877164.1 tyrosine-protein kinase family protein -
  VVMO6_RS08130 (VVM_03128) - 1724671..1725471 (+) 801 WP_013571856.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  VVMO6_RS08135 (VVM_03130) - 1725495..1727783 (+) 2289 WP_013571857.1 ATP-binding protein -
  VVMO6_RS08140 (VVM_03133) luxO 1727940..1729433 (+) 1494 WP_013571858.1 sigma-54 dependent transcriptional regulator Regulator
  VVMO6_RS08145 (VVM_03134) - 1729426..1730559 (+) 1134 WP_013571859.1 glycosyltransferase -
  VVMO6_RS08150 (VVM_03136) - 1730667..1731860 (+) 1194 WP_013571860.1 glycosyltransferase family 4 protein -
  VVMO6_RS08155 (VVM_03137) - 1731857..1733035 (+) 1179 WP_013571861.1 glycosyltransferase family 4 protein -

Sequence


Protein


Download         Length: 497 a.a.        Molecular weight: 55767.84 Da        Isoelectric Point: 6.5960

>NTDB_id=39679 VVMO6_RS08140 WP_013571858.1 1727940..1729433(+) (luxO) [Vibrio vulnificus MO6-24/O]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMSGEDVLDWINQNDIPTAVIIA
TAHGSVDIAVSLMSKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENMQSRFDRPRYHGFIGACLPMQAVYKTIDSVA
PTTASVFINGESGTGKEVCAEAIHKQSLRKEQPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTFTPLGGSKEVKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNVEHLPAQLTTKPQTVKEPAKL
STPPQPAQAVVHEMHNGHEALNHHSLETQRSMANPLTHNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=39679 VVMO6_RS08140 WP_013571858.1 1727940..1729433(+) (luxO) [Vibrio vulnificus MO6-24/O]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAGCCCTA
TGACATTTTTCACGTAGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACGCCTCAACTGGTGATTTTGGATC
TCAAGTTGCCCGATATGTCCGGGGAAGATGTGCTCGACTGGATCAACCAAAACGATATTCCGACCGCGGTGATCATTGCC
ACAGCTCATGGTTCCGTTGACATCGCCGTCAGCTTAATGAGCAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATCAAAGC
CGACCGTTTGAAAACATCCATTGCCGTTCATCTAAAACGCGCCAAGTTAGAGCATTTGGTTGAGAACATGCAATCTCGCT
TCGACAGACCACGTTATCATGGCTTTATCGGCGCGTGCCTGCCAATGCAGGCCGTTTATAAAACCATTGATTCCGTGGCA
CCAACCACCGCCAGTGTTTTTATCAACGGAGAGAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATCCACAAACAGAG
CCTACGCAAAGAGCAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACCGGAGCGACAACCGACCGCAAAGGTGCAGCAATGCTGGCCAACGGCGGCACTTTGTTTCTC
GATGAATTGTGCGAAATGGAACTGGAGATGCAGAAAAAACTGCTGCGTTTTCTTCAGACTGGTACCTTCACCCCACTCGG
CGGCAGTAAAGAAGTTAAAGTGGATGTGCGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCCATTGAAATGCCGCCACTGAGAGAACGAGGTAACGACATT
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAGGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCGCA
ATCAATACTCAAAAAATACAACTGGCCGGGCAATGTTCGTCAGTTGCAAAACATCATTCGCAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATGTGGAACATTTGCCGGCTCAACTCACCACCAAACCGCAAACCGTCAAAGAACCCGCTAAACTC
TCAACCCCACCTCAACCTGCTCAAGCGGTCGTACACGAGATGCACAACGGACATGAGGCGTTAAACCATCACTCGCTTGA
GACGCAAAGGTCCATGGCCAACCCACTCACCCACAATGCCTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TCGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGATGGCAACGTGATCAGTGCAGCGGTGATGCTGGAGCTAAGC
CCCTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

51.029

97.787

0.499


Multiple sequence alignment