Detailed information NTG0039676

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: VVMO6_RS03130
• Genome accession: NC_014965
• Coordinates: 643966..647355 (-)
• Length: 1129 a.a.
• NCBI ID: WP_011151097.1
• Uniprot ID: -
• Organism: Vibrio vulnificus MO6-24/O
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 638966..652355

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVMO6_RS03115 (VVM_01118)	-	639169..640194 (-)	1026	WP_011079591.1	ABC transporter permease	-
VVMO6_RS03120 (VVM_01119)	-	640197..641183 (-)	987	WP_011079592.1	ABC transporter permease	-
VVMO6_RS03125 (VVM_01121)	-	641352..643025 (-)	1674	WP_011079593.1	ABC transporter substrate-binding protein	-
VVMO6_RS03130 (VVM_01123)	chiS	643966..647355 (-)	3390	WP_011151097.1	response regulator	Regulator
VVMO6_RS03135 (VVM_01127)	rsmC	647602..648624 (-)	1023	WP_013571165.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
VVMO6_RS03140 (VVM_01129)	-	648698..649783 (-)	1086	WP_013571166.1	AI-2E family transporter	-
VVMO6_RS03145 (VVM_01133)	hemL	650033..651328 (-)	1296	WP_013571168.1	glutamate-1-semialdehyde 2,1-aminomutase	-
VVMO6_RS03150 (VVM_01134)	erpA	651615..651956 (+)	342	WP_026130638.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127463.42 Da
• Isoelectric Point: 5.8916

>NTDB_id=39676 VVMO6_RS03130 WP_011151097.1 643966..647355(-) (chiS) [Vibrio vulnificus MO6-24/O]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSFVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPDTLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILDHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=39676 VVMO6_RS03130 WP_011151097.1 643966..647355(-) (chiS) [Vibrio vulnificus MO6-24/O]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGTACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAACAGAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAACAACAACAGATCCTGGATTATTTCCAAGCACAAGAAACAGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTGGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TCGAGAAAACGCTCAACAGCGCTATATTCAGGGGTCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
TTGTTGGTAGTGAACGCTACCGTTTACTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGCTCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAAGGGCCTTTTAAAGAGAGCATGCTCGGCAAAAGCTTTCGTCAGTTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCTGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGTGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACCAAACTGATTGCAGACATTAA
TAAAGATGCAGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACGATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTGACGGATGTGGGGACTTATATCAACAGCAGCGGTGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAGGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCTATGTTGATTGCAATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAGCGCAAAGACGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAACGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCAACTACCTCTCATGAGCTACGCACTCCACTGCATGGTATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCCAACCAGCGCTATCAACTGGACATTATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCGACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCCGGTCTGGGACTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCCATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCGCCAGATAGCAATGAATTGATCTCATTAGATAATTCATCACTGCCAGAAAATCCC
AATGGTCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGACACTCTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGCATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAATTGCCTATTATC
ATGCTAACGGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGAGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATTAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCAGAGCTTCGCCAACGTGCAATGGTGGAAGCAAGCTTACTGGAAACACAAGGGCGTCTATTAGAACAATTG
GAATCGGCCCCAGAAGCCATTATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGCTCAAACGCAGAAGAACTTATTGCACCCAAATATTTAACCGTCAAACAGCAGC
ACTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGATATCCTTAAACTACCAGAAGGG
TCTGGCCTTGATGCGATGTTTATCTTTAATGTCGGGGGAGGCGCAGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACGCTCGATAAATACATGCGTATTGAAACCTTGCCAAAAACGCCGCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGACCACTGTAAAGAGCAAAGCCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-837)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (877-926)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.148	100	0.771