Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HPT07_RS11490 | Genome accession | NZ_CP053917 |
| Coordinates | 2398263..2398628 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain PSE6684 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2393263..2403628
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPT07_RS11475 (HPT07_11475) | pilK | 2394607..2395482 (-) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
| HPT07_RS11480 (HPT07_11480) | pilJ | 2395543..2397591 (-) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| HPT07_RS11485 (HPT07_11485) | - | 2397676..2398212 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HPT07_RS11490 (HPT07_11490) | pilH | 2398263..2398628 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HPT07_RS11495 (HPT07_11495) | pilG | 2398675..2399082 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HPT07_RS11500 (HPT07_11500) | gshB | 2399337..2400290 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| HPT07_RS11505 (HPT07_11505) | - | 2400437..2401330 (+) | 894 | WP_003084580.1 | TonB family protein | - |
| HPT07_RS11510 (HPT07_11510) | - | 2401379..2401948 (+) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| HPT07_RS11515 (HPT07_11515) | ruvX | 2401948..2402382 (+) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| HPT07_RS11520 (HPT07_11520) | pyrR | 2402494..2403006 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=396679 HPT07_RS11490 WP_003084587.1 2398263..2398628(-) (pilH) [Pseudomonas aeruginosa strain PSE6684]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=396679 HPT07_RS11490 WP_003084587.1 2398263..2398628(-) (pilH) [Pseudomonas aeruginosa strain PSE6684]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |