Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   HQ616_RS09615 Genome accession   NZ_CP053891
Coordinates   1902456..1903790 (-) Length   444 a.a.
NCBI ID   WP_001089364.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain GBS20     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1897456..1908790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQ616_RS09585 (HQ616_09540) - 1897730..1898155 (-) 426 WP_000823117.1 PTS mannose transporter subunit IIA -
  HQ616_RS09590 (HQ616_09545) - 1898402..1899436 (-) 1035 WP_000369173.1 acyltransferase family protein -
  HQ616_RS09595 (HQ616_09550) - 1899665..1900819 (-) 1155 WP_000623425.1 ABC transporter permease subunit -
  HQ616_RS09600 (HQ616_09555) - 1900825..1901672 (-) 848 Protein_1824 ABC transporter ATP-binding protein -
  HQ616_RS09605 (HQ616_09560) - 1901741..1901914 (-) 174 WP_000683599.1 hypothetical protein -
  HQ616_RS09610 (HQ616_09565) - 1902203..1902367 (+) 165 Protein_1826 cysteine peptidase family C39 domain-containing protein -
  HQ616_RS09615 (HQ616_09570) comD/blpH 1902456..1903790 (-) 1335 WP_001089364.1 sensor histidine kinase Regulator
  HQ616_RS09620 (HQ616_09575) comE/blpR 1903787..1904539 (-) 753 WP_001019939.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  HQ616_RS09625 (HQ616_09580) - 1904755..1905570 (-) 816 WP_001029866.1 endonuclease/exonuclease/phosphatase family protein -
  HQ616_RS09630 (HQ616_09585) - 1905624..1907807 (-) 2184 WP_000795065.1 PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 444 a.a.        Molecular weight: 51279.06 Da        Isoelectric Point: 8.0286

>NTDB_id=396631 HQ616_RS09615 WP_001089364.1 1902456..1903790(-) (comD/blpH) [Streptococcus agalactiae strain GBS20]
MNSTLSILEIALTIILTIFLFSKISGRQLTLIEIGICIALRLGLVILFIAANTIINLSFLKYWLLPIYMLSLAFLLLRPI
SKTLVVFYGLFPIVLRNLCSRSLAFFVFPLFNIDFHTTNQGFWGYFVDVLSTLCVLLFLRWMQYDFKALRSSEVSPTDRR
ILQFTNGCMVSYYLLMQFLTYFEYELAINTVIYRQFLLVAYWIIFTGAIASLDRRLRNSLQERLAVQRELQLANMIDYSH
HIEGLYKEVRSFRHDYSNMLTTLKLGIDNEDISIVKSVYQSIFKESNTHFRHPKYNIDRLVNVDNPALKSLLAAKLSQAI
DNHIMVSIEVPDSIKPQGMELIDFITIVSVLWDNAIEASLETDDPKIAMSYFTLKHKQIFIIENSTKEKAIDTSMIFNYE
ISSKGQNRGIGLYNVRGVINRYPNISIATSSQDFSFCQTFEIIL

Nucleotide


Download         Length: 1335 bp        

>NTDB_id=396631 HQ616_RS09615 WP_001089364.1 1902456..1903790(-) (comD/blpH) [Streptococcus agalactiae strain GBS20]
ATGAATTCTACTCTATCCATCTTAGAGATAGCTTTAACGATAATATTAACAATATTTCTCTTTTCTAAAATCAGTGGACG
TCAATTAACTTTAATAGAGATTGGAATTTGTATTGCTCTGAGATTAGGACTTGTAATTTTATTTATAGCAGCTAATACTA
TTATTAATCTTTCATTTCTAAAGTACTGGCTTCTCCCCATCTATATGTTAAGTCTGGCTTTCTTGTTGCTAAGACCTATA
TCTAAAACTTTAGTAGTCTTTTATGGCTTGTTTCCAATTGTTCTCAGAAATCTTTGTTCACGTTCTTTAGCTTTTTTTGT
CTTTCCTTTGTTTAATATTGATTTTCATACAACCAACCAGGGGTTTTGGGGATATTTTGTTGATGTCTTGTCTACTCTTT
GTGTTCTCTTATTTTTAAGATGGATGCAATACGATTTTAAAGCATTGCGAAGTAGTGAAGTTTCGCCAACAGATAGGAGA
ATTCTCCAATTTACGAATGGGTGCATGGTGAGTTATTACTTATTGATGCAGTTTTTAACTTACTTCGAATATGAATTAGC
CATCAATACTGTTATTTACCGACAATTTTTGCTTGTTGCTTATTGGATTATATTTACGGGAGCAATAGCCAGTTTAGACC
GGAGACTTCGAAATTCTTTACAGGAGAGGTTAGCTGTTCAAAGAGAACTCCAATTGGCTAATATGATAGATTATAGCCAC
CATATTGAGGGGTTGTATAAAGAAGTTAGGAGCTTCCGACATGATTATAGTAACATGTTAACGACCTTGAAACTAGGGAT
TGATAATGAAGATATATCTATTGTCAAATCAGTTTATCAGTCTATCTTTAAAGAATCTAATACACATTTCCGACATCCTA
AGTATAATATAGACCGGTTGGTTAATGTAGATAACCCAGCCTTAAAAAGTCTTTTAGCAGCCAAGCTTTCACAAGCGATA
GACAATCATATTATGGTATCTATAGAAGTACCAGACAGTATTAAACCTCAAGGGATGGAACTGATTGATTTTATTACCAT
TGTATCTGTTTTATGGGATAACGCTATTGAGGCTTCTTTAGAGACAGACGATCCTAAGATAGCCATGTCTTATTTTACAT
TAAAACATAAACAAATTTTTATCATAGAAAATTCAACTAAGGAAAAGGCAATAGATACGTCAATGATATTCAATTATGAG
ATAAGTAGTAAGGGACAGAATAGAGGAATAGGTCTTTACAATGTCAGGGGAGTTATCAATCGTTATCCAAATATTTCTAT
TGCAACAAGTAGCCAAGATTTTAGTTTCTGCCAAACTTTCGAAATCATATTATAG

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(339-439)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

35.683

100

0.365