Detailed information NTG0039657

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VVMO6_RS01630
• Genome accession: NC_014965
• Coordinates: 323210..324217 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus MO6-24/O
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 318210..329217

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVMO6_RS01600 (VVM_00559)	zapB	318335..318577 (-)	243	WP_011079328.1	cell division protein ZapB	-
VVMO6_RS01605 (VVM_00561)	rraA	318799..319320 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
VVMO6_RS01610 (VVM_00563)	-	319396..320313 (-)	918	WP_013571020.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VVMO6_RS01615 (VVM_00565)	hslU	320479..321810 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
VVMO6_RS01620 (VVM_00566)	hslV	321838..322392 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
VVMO6_RS01625 (VVM_00569)	-	322543..323100 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
VVMO6_RS01630 (VVM_00571)	cytR	323210..324217 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
VVMO6_RS01635 (VVM_00575)	priA	324446..326650 (-)	2205	WP_013571023.1	primosomal protein N'	-
VVMO6_RS01640 (VVM_00576)	rpmE	326931..327152 (+)	222	WP_011151292.1	50S ribosomal protein L31	-
VVMO6_RS01645 (VVM_00577)	-	327431..328708 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
VVMO6_RS01650 (VVM_00579)	metJ	328795..329112 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=39657 VVMO6_RS01630 WP_011079334.1 323210..324217(-) (cytR) [Vibrio vulnificus MO6-24/O]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=39657 VVMO6_RS01630 WP_011079334.1 323210..324217(-) (cytR) [Vibrio vulnificus MO6-24/O]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGCGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTATTGCTCGGTACTGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTTGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTGCGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875