Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   STH8232_RS05735 Genome accession   NC_017581
Coordinates   1098129..1098611 (-) Length   160 a.a.
NCBI ID   WP_011226072.1    Uniprot ID   Q5M461
Organism   Streptococcus thermophilus JIM 8232     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1093129..1103611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STH8232_RS05715 (STH8232_1321) pepT 1093611..1094834 (-) 1224 WP_014621655.1 peptidase T -
  STH8232_RS05720 (STH8232_1323) lepB 1095041..1095598 (-) 558 WP_014621656.1 signal peptidase I -
  STH8232_RS05725 (STH8232_1324) - 1095721..1096950 (-) 1230 WP_041829049.1 tetratricopeptide repeat protein -
  STH8232_RS05730 (STH8232_1325) - 1096940..1098118 (-) 1179 WP_014621658.1 AI-2E family transporter -
  STH8232_RS05735 (STH8232_1326) mutX 1098129..1098611 (-) 483 WP_011226072.1 NUDIX hydrolase Machinery gene
  STH8232_RS05740 (STH8232_1327) ftsX 1098767..1099696 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  STH8232_RS05745 (STH8232_1328) ftsE 1099689..1100381 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  STH8232_RS05755 (STH8232_1331) queG 1101620..1102738 (-) 1119 WP_041829051.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18869.36 Da        Isoelectric Point: 4.7200

>NTDB_id=39648 STH8232_RS05735 WP_011226072.1 1098129..1098611(-) (mutX) [Streptococcus thermophilus JIM 8232]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=39648 STH8232_RS05735 WP_011226072.1 1098129..1098611(-) (mutX) [Streptococcus thermophilus JIM 8232]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5M461

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706