Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   STH8232_RS02670 Genome accession   NC_017581
Coordinates   491955..492761 (+) Length   268 a.a.
NCBI ID   WP_014621243.1    Uniprot ID   -
Organism   Streptococcus thermophilus JIM 8232     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 486955..497761
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STH8232_RS02650 (STH8232_0599) tuf 488002..489198 (+) 1197 WP_002949971.1 elongation factor Tu -
  STH8232_RS02655 (STH8232_0600) tpiA 489447..490205 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  STH8232_RS02660 (STH8232_0601) tmk 490445..491074 (+) 630 WP_002946312.1 dTMP kinase -
  STH8232_RS02665 (STH8232_0602) - 491083..491958 (+) 876 WP_014621242.1 DNA polymerase III subunit delta' -
  STH8232_RS02670 (STH8232_0603) yaaT 491955..492761 (+) 807 WP_014621243.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  STH8232_RS02675 (STH8232_0604) yabA 492748..493068 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  STH8232_RS02680 (STH8232_0605) rsmI 493071..493937 (+) 867 WP_014621244.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  STH8232_RS02685 (STH8232_0606) - 494075..495310 (+) 1236 WP_014621245.1 ammonium transporter -
  STH8232_RS02690 (STH8232_0607) - 495321..495662 (+) 342 WP_014621246.1 P-II family nitrogen regulator -
  STH8232_RS02695 (STH8232_0608) - 495760..496416 (+) 657 WP_014621247.1 glycoside hydrolase family 73 protein -
  STH8232_RS02700 (STH8232_0609) - 496439..497260 (+) 822 WP_011680842.1 Cof-type HAD-IIB family hydrolase -
  STH8232_RS11565 - 497279..497749 (-) 471 Protein_468 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29827.32 Da        Isoelectric Point: 4.7058

>NTDB_id=39632 STH8232_RS02670 WP_014621243.1 491955..492761(+) (yaaT) [Streptococcus thermophilus JIM 8232]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMRVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEVIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=39632 STH8232_RS02670 WP_014621243.1 491955..492761(+) (yaaT) [Streptococcus thermophilus JIM 8232]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTCTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCCGTGGATTTGAATAGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGAGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTATC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACAGAGATA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGTGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGGGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

41.948

99.627

0.418

Multiple sequence alignment