Detailed information NTG0396198

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GG619_RS02005
• Genome accession: NZ_CP045711
• Coordinates: 399162..400310 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain HN-Q-8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 394162..405310

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GG619_RS01985 (GG619_01985)	-	394560..395243 (-)	684	WP_033575085.1	ABC transporter ATP-binding protein	-
GG619_RS01990 (GG619_01990)	-	395258..396694 (-)	1437	WP_033575084.1	ABC transporter permease	-
GG619_RS01995 (GG619_01995)	-	396906..397589 (+)	684	WP_007410267.1	response regulator transcription factor	-
GG619_RS02000 (GG619_02000)	-	397576..399009 (+)	1434	WP_193334279.1	sensor histidine kinase	-
GG619_RS02005 (GG619_02005)	rapC	399162..400310 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
GG619_RS02010 (GG619_02010)	phrC	400294..400413 (+)	120	WP_031378677.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GG619_RS02015 (GG619_02015)	-	400562..400672 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
GG619_RS02020 (GG619_02020)	-	400752..402116 (-)	1365	WP_015416811.1	aspartate kinase	-
GG619_RS02025 (GG619_02025)	ceuB	402530..403483 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
GG619_RS02030 (GG619_02030)	-	403473..404420 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
GG619_RS02035 (GG619_02035)	-	404414..405172 (+)	759	WP_015416812.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=396198 GG619_RS02005 WP_007410270.1 399162..400310(+) (rapC) [Bacillus velezensis strain HN-Q-8]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=396198 GG619_RS02005 WP_007410270.1 399162..400310(+) (rapC) [Bacillus velezensis strain HN-Q-8]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568