Detailed information    

insolico Bioinformatically predicted

Overview


Name   mutX   Type   Machinery gene
Locus tag   HQ613_RS06700 Genome accession   NZ_CP053886
Coordinates   1276271..1276753 (-) Length   160 a.a.
NCBI ID   WP_000163512.1    Uniprot ID   Q8DZB3
Organism   Streptococcus agalactiae strain SS114     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1271271..1281753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HQ613_RS06680 (HQ613_06655) alsS 1271530..1273212 (-) 1683 WP_000140344.1 acetolactate synthase AlsS -
  HQ613_RS06685 (HQ613_06660) - 1273322..1274548 (-) 1227 WP_000934868.1 hypothetical protein -
  HQ613_RS06690 (HQ613_06665) - 1274538..1275728 (-) 1191 WP_001081534.1 AI-2E family transporter -
  HQ613_RS06695 (HQ613_06670) - 1275820..1276281 (-) 462 WP_000796053.1 NUDIX hydrolase -
  HQ613_RS06700 (HQ613_06675) mutX 1276271..1276753 (-) 483 WP_000163512.1 8-oxo-dGTP diphosphatase Machinery gene
  HQ613_RS06705 (HQ613_06680) hylB 1276971..1280189 (+) 3219 WP_000403414.1 hyaluronate lyase -
  HQ613_RS06710 (HQ613_06685) rfbB 1280241..1281287 (-) 1047 WP_000134275.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 160 a.a.        Molecular weight: 18837.23 Da        Isoelectric Point: 4.5116

>NTDB_id=396071 HQ613_RS06700 WP_000163512.1 1276271..1276753(-) (mutX) [Streptococcus agalactiae strain SS114]
MTKLATICYIDNGKELLLLHRNKKENDVHEGKWISVGGKLEAGETPDECAKREILEETHLTVKKMDFKGVITFPEFTPGH
DWYTYVFKVTDYEGELISDDESREGTLEWVPYDQVLSKPTWQGDYEIFKWILEDVPFFSAKFVYDEHQNLIEKTVNFYEK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=396071 HQ613_RS06700 WP_000163512.1 1276271..1276753(-) (mutX) [Streptococcus agalactiae strain SS114]
ATGACTAAATTAGCAACAATTTGTTACATTGACAATGGCAAGGAATTACTTCTATTGCACCGCAACAAAAAAGAGAATGA
TGTTCATGAGGGAAAGTGGATCTCGGTAGGCGGTAAACTGGAGGCAGGTGAAACTCCTGATGAATGTGCTAAGCGTGAAA
TTCTAGAAGAAACCCATTTAACAGTAAAAAAAATGGATTTTAAAGGAGTCATCACTTTTCCTGAATTTACGCCAGGTCAT
GATTGGTATACCTATGTCTTTAAAGTAACAGATTATGAAGGAGAGTTAATTTCAGATGATGAATCACGAGAAGGAACTTT
AGAATGGGTACCATATGATCAAGTTCTCTCTAAGCCAACGTGGCAAGGAGATTACGAAATTTTTAAATGGATTTTAGAAG
ATGTTCCTTTCTTTTCTGCTAAGTTTGTTTATGATGAACACCAAAATTTAATTGAAAAGACGGTTAATTTTTATGAAAAA
TAG

Domains


Predicted by InterProScan.

(3-130)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DZB3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.698

99.375

0.712


Multiple sequence alignment