Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   GFH30_RS01495 Genome accession   NZ_CP045650
Coordinates   335637..337859 (-) Length   740 a.a.
NCBI ID   WP_153373327.1    Uniprot ID   A0A5Q0P7Z2
Organism   Acinetobacter wanghuae strain dk386     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 330637..342859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFH30_RS01475 (GFH30_01485) - 331730..331993 (-) 264 WP_153370478.1 YdcH family protein -
  GFH30_RS01480 (GFH30_01490) - 332079..332405 (-) 327 WP_153370480.1 chaperone modulator CbpM -
  GFH30_RS01485 (GFH30_01495) - 332808..333683 (-) 876 WP_153370482.1 Hsp33 family molecular chaperone HslO -
  GFH30_RS01490 (GFH30_01500) - 333734..335581 (-) 1848 WP_153370484.1 cation:proton antiporter -
  GFH30_RS01495 (GFH30_01505) priA 335637..337859 (-) 2223 WP_153373327.1 primosomal protein N' Machinery gene
  GFH30_RS01500 (GFH30_01510) gspF 338010..339215 (+) 1206 WP_153370485.1 type II secretion system inner membrane protein GspF -
  GFH30_RS01505 (GFH30_01515) gspG 339310..339744 (+) 435 WP_153370487.1 type II secretion system major pseudopilin GspG -
  GFH30_RS01510 (GFH30_01520) - 340028..340363 (+) 336 WP_153370489.1 hypothetical protein -
  GFH30_RS01515 (GFH30_01525) lnt 340510..342069 (-) 1560 WP_153370491.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84150.35 Da        Isoelectric Point: 8.6436

>NTDB_id=395899 GFH30_RS01495 WP_153373327.1 335637..337859(-) (priA) [Acinetobacter wanghuae strain dk386]
MPNSIDSSALLYRVRVAVPVYLFDCFDYLLSQQQYEQAEVGARVAVSFGRQNLVGIIMQKLPLDEPLDPRFKLKNISELL
DDRAIIDETVLNLLKWSAQYYQFPIGEVVHSALPTLLRQGKPYNLLARTWKLLDMNAESKVRRSEKQQDAYKVLKLHPVG
TAENILNMAGIETATLKALAKKEICECVLEPQDFSPQVVQMAQMPLSANEEQKRAIAQVLKFKNKYQAFLLDGLTGSGKT
EVYLQIMEQVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQAAETGKASIVLGTRSAIYTPM
PHLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLQQCPVVLGSATPSIDSFALVENGKMQSLELNQRAGSALMPKIHI
LDLKVAQKQHGISLLLIQEIQKRLERKEQVLVFLNRRGYAPVLICDSCGWQAQCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPEHCPSCNHTELKPLGMGTAKVEEHLNELFPDHDVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVSGRAGRGERKGDVYLQTLRPDHALLNTLVQENYRTFAKQTLKERQIAMM
PPFRYAALIRCESKQQNLNTDFLQKHAALLRQYPDLALDIWGPIPAPMERKAGRYQSHMVLLSANRARLHYYLKDWWQNM
LSDKPSTMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=395899 GFH30_RS01495 WP_153373327.1 335637..337859(-) (priA) [Acinetobacter wanghuae strain dk386]
ATGCCAAATTCTATCGACAGTTCAGCTCTCTTATACCGTGTTCGCGTTGCTGTTCCTGTTTATCTATTTGATTGTTTTGA
CTACCTACTCAGTCAGCAACAATATGAGCAAGCGGAAGTCGGTGCTCGGGTCGCCGTGTCTTTTGGTCGGCAAAATTTAG
TCGGCATCATTATGCAAAAGTTGCCGCTTGATGAACCGCTAGACCCACGTTTTAAACTCAAAAATATTAGCGAACTGTTG
GATGATCGCGCCATTATTGATGAGACAGTATTGAATTTACTGAAATGGTCAGCCCAATATTATCAATTCCCGATTGGTGA
AGTGGTACATAGTGCATTACCGACCTTATTGCGCCAAGGAAAACCCTATAATTTACTGGCGCGTACATGGAAGCTTTTGG
ATATGAATGCCGAAAGCAAAGTACGCCGTTCGGAAAAACAACAAGATGCTTATAAAGTTTTAAAGCTGCATCCGGTCGGT
ACAGCGGAAAATATTTTAAATATGGCAGGCATTGAAACCGCGACCTTAAAAGCACTCGCTAAAAAAGAGATTTGTGAATG
TGTACTTGAGCCGCAAGATTTTAGCCCGCAAGTGGTACAGATGGCACAAATGCCGCTCAGCGCCAATGAAGAACAAAAAC
GTGCCATTGCTCAAGTCCTTAAATTTAAAAATAAATATCAAGCTTTTCTGCTCGATGGCTTAACGGGTAGTGGTAAAACT
GAAGTGTATTTACAGATCATGGAACAGGTGCTGAAACAAGGCAAGCAAGTCCTTGTTTTAGTCCCTGAAATTGGTCTGAC
ACCGCAAACCATTAGTCGCTTCCAATCACGTTTCCACTGTCATATTGCACTGCTGCATTCAGGTTTAAATGACAGTAAAC
GCCTACAAGCATGGCAAGCAGCGGAAACAGGTAAAGCATCCATTGTTTTAGGTACGCGTTCTGCTATTTATACGCCAATG
CCTCATCTTGGACTGATCATCCTCGATGAGGAACACGATTTGTCCTTTAAACAACAAGAAGGGTTCCGCTATCACGCACG
TGATGTGGCATTGTATCGTGCGCATTTACAACAATGTCCTGTAGTGTTAGGTTCTGCCACGCCTAGCATCGATAGTTTTG
CTTTGGTCGAAAATGGCAAAATGCAATCGCTTGAATTGAATCAACGTGCAGGTTCGGCACTCATGCCCAAGATCCATATT
TTGGATTTGAAAGTTGCGCAAAAGCAGCATGGTATTAGTCTCTTGCTGATTCAAGAAATTCAAAAACGTTTAGAGCGTAA
AGAACAAGTCTTAGTCTTTCTAAACCGTCGCGGTTATGCACCGGTACTTATTTGCGATAGTTGTGGTTGGCAAGCTCAGT
GTCCACATTGCGATGCGAACTTTACCGTGCATCGTCAGCCTTATCAGCATTTGCATTGCCATCACTGCGGCACCATTCAT
CGGATGCCGGAGCATTGCCCAAGCTGCAATCACACCGAACTCAAACCACTGGGTATGGGCACAGCCAAAGTCGAAGAACA
TTTGAATGAACTATTCCCCGATCATGATGTGATTCGAGTCGATCGTGATTCGACCAGTCGGGTCGGCAGCTGGCAAAAAA
TTTATGACAAAATCCAAAAGAGCGAGCCGGCAATTTTACTGGGCACGCAGATGCTTGCAAAGGGTCACCATTTCCCGTAT
GTCACCTTGGTCGCAATTTTAGATATTGATTCAGGTTTACTCAGTGTCGACTTTCGAGCAACGGAACGCACCGCACAGTT
GATTGTGCAGGTCTCAGGGCGTGCCGGTCGTGGTGAGCGTAAAGGCGATGTCTATTTACAAACCCTACGCCCCGATCATG
CATTATTAAATACATTGGTTCAGGAAAATTATCGTACGTTTGCCAAACAAACTTTAAAAGAACGTCAAATTGCGATGATG
CCACCGTTTCGATATGCAGCTTTAATTCGCTGTGAATCTAAGCAACAAAACTTAAATACCGACTTCCTGCAAAAACATGC
AGCATTGCTACGTCAATATCCCGATTTAGCTTTGGATATTTGGGGACCCATTCCTGCCCCGATGGAACGTAAGGCAGGTC
GCTACCAATCCCATATGGTGTTGCTATCTGCGAATCGTGCACGCTTACATTATTATTTAAAAGATTGGTGGCAAAACATG
CTGAGCGATAAGCCCTCAACCATGAAATTAACCTTGGATATTGACCCACAAGAGTTAAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Type III restriction enzyme, res subunit (ResIII)

(208-369)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Q0P7Z2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.845

99.189

0.703

Multiple sequence alignment