Detailed information NTG0395655

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: GE376_RS26075
• Genome accession: NZ_CP045606
• Coordinates: 5136798..5138147 (-)
• Length: 449 a.a.
• NCBI ID: WP_097984209.1
• Uniprot ID: -
• Organism: Bacillus cereus strain SB1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5131798..5143147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE376_RS26055 (GE376_26640)	secA	5132124..5134631 (-)	2508	WP_000579372.1	preprotein translocase subunit SecA	-
GE376_RS26060 (GE376_26645)	hpf	5134905..5135447 (-)	543	WP_000671189.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
GE376_RS26065 (GE376_26650)	cspC	5135771..5135968 (-)	198	WP_001990088.1	cold shock protein CspC	-
GE376_RS26070 (GE376_26655)	-	5136095..5136798 (-)	704	Protein_5151	ComF family protein	-
GE376_RS26075 (GE376_26660)	comFA	5136798..5138147 (-)	1350	WP_097984209.1	ATP-dependent helicase ComFA	Machinery gene
GE376_RS26080 (GE376_26665)	-	5138275..5139702 (-)	1428	WP_000499486.1	NlpC/P60 family protein	-
GE376_RS26085 (GE376_26670)	-	5139851..5140165 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
GE376_RS26090 (GE376_26675)	-	5140338..5141180 (-)	843	WP_000684727.1	DegV family protein	-
GE376_RS26095 (GE376_26680)	-	5141417..5142052 (+)	636	WP_000926670.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51057.89 Da
• Isoelectric Point: 9.9151

>NTDB_id=395655 GE376_RS26075 WP_097984209.1 5136798..5138147(-) (comFA) [Bacillus cereus strain SB1]
MLAGKQLLLDELSSDLQRELNDLKKKGEVVCVQGVKKKASKYVCQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECALLVRGIAERKREKNLNLLRWSGTLSTGQNLAAQGVIEAIKRKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVMVVDEIDAFPYCADQMLQYAVKQAM
KERAARIYLTATPDETWKQKFRRGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLIHKRIPRVLLQWLQTYLNKKYPIFL
FVPHVRYIEEISLLLKSLNKRIEGVHAEDPGRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVVYFHYGKTEAMVHAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=395655 GE376_RS26075 WP_097984209.1 5136798..5138147(-) (comFA) [Bacillus cereus strain SB1]
ATGCTAGCGGGGAAACAGTTGCTATTAGACGAACTTTCTTCAGATTTACAGAGGGAATTAAATGATTTGAAAAAGAAGGG
AGAGGTCGTGTGTGTACAAGGTGTAAAAAAGAAGGCTTCTAAATATGTATGTCAGCGCTGTGGAAATATAGAACAGCGGC
TATTTGCGTCATTTTTATGTAAAAGATGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTTTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTTAAACTTGTTACGGTGGAGCGGAACGTT
GTCTACTGGTCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCGAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCGAGAACGGATGTTGTTCTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTGGATAAAGAAAAAGATGCAGTACTAGTCGTTGCAACCACGCATCAATTATTGCGTTATTATAGGGCGTTTC
ATGTCATGGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAGAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCAAAAATTTAGAAGAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCTTTGCCAGTTCCTTTATTTTGTTGGTGCGGGAATTGGAAAAAAA
GCCTCATTCATAAAAGAATTCCTCGAGTTTTACTACAGTGGTTACAAACGTACTTAAATAAAAAATATCCTATTTTTTTA
TTTGTCCCCCATGTGCGATATATAGAAGAGATAAGCCTGTTGTTAAAGTCATTAAACAAGCGAATTGAAGGTGTACATGC
AGAAGATCCGGGTAGAAAAGAAAAAGTAGCGGCTTTCAGAAAAGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACAGTAAAAAATTTGCAAGTAGCGGTTTTAGGGGCGGAAGAAGAAATATTCTCAGAAAGTGCACTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCGTTTATTTTCACTATGGTAAGACAGAGGC
GATGGTGCACGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.452	98.441	0.497
comFA	Latilactobacillus sakei subsp. sakei 23K	41.457	88.641	0.367