Detailed information NTG0395496

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: GFB63_RS09090
• Genome accession: NZ_CP045596
• Coordinates: 1763780..1764661 (+)
• Length: 293 a.a.
• NCBI ID: WP_111679622.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain TK-P3A
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1758780..1769661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GFB63_RS10770	-	1759923..1760735 (+)	813	WP_228024384.1	hypothetical protein	-
GFB63_RS09070 (GFB63_09320)	galE	1760750..1761763 (+)	1014	WP_014621668.1	UDP-glucose 4-epimerase GalE	-
GFB63_RS09075 (GFB63_09325)	-	1761951..1762187 (+)	237	WP_002946959.1	DUF1146 family protein	-
GFB63_RS09080 (GFB63_09330)	murA	1762257..1763528 (+)	1272	WP_024704149.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
GFB63_RS09085 (GFB63_09335)	-	1763530..1763718 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
GFB63_RS09090 (GFB63_09340)	endA	1763780..1764661 (+)	882	WP_111679622.1	DNA/RNA non-specific endonuclease	Machinery gene
GFB63_RS09095 (GFB63_09345)	-	1764732..1765382 (-)	651	WP_100273221.1	amino acid ABC transporter permease	-
GFB63_RS09100 (GFB63_09350)	-	1765394..1766092 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
GFB63_RS09105 (GFB63_09355)	-	1766110..1766943 (-)	834	WP_002953142.1	transporter substrate-binding domain-containing protein	-
GFB63_RS09110 (GFB63_09360)	-	1766955..1767722 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
GFB63_RS09115 (GFB63_09365)	vicR	1768249..1768956 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31789.50 Da
• Isoelectric Point: 10.1789

>NTDB_id=395496 GFB63_RS09090 WP_111679622.1 1763780..1764661(+) (endA) [Streptococcus thermophilus strain TK-P3A]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=395496 GFB63_RS09090 WP_111679622.1 1763780..1764661(+) (endA) [Streptococcus thermophilus strain TK-P3A]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGTCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.385	81.57	0.59
endA	Streptococcus pneumoniae D39	72.385	81.57	0.59
endA	Streptococcus pneumoniae R6	72.385	81.57	0.59
endA	Streptococcus pneumoniae TIGR4	72.385	81.57	0.59