Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   GD578_RS15795 Genome accession   NZ_CP045560
Coordinates   3273780..3278303 (-) Length   1507 a.a.
NCBI ID   WP_153518680.1    Uniprot ID   A0AB37CZK2
Organism   Acinetobacter nosocomialis strain AC1530     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3268780..3283303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GD578_RS15765 (GD578_15980) elsL 3269532..3270035 (-) 504 WP_002051179.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  GD578_RS15770 (GD578_15985) - 3270185..3270553 (-) 369 WP_002051275.1 YbaN family protein -
  GD578_RS15775 (GD578_15990) - 3270658..3271551 (+) 894 WP_002051249.1 DUF1853 family protein -
  GD578_RS15780 (GD578_15995) - 3271664..3271807 (+) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  GD578_RS15785 (GD578_16000) dapE 3271933..3273066 (+) 1134 WP_002051523.1 succinyl-diaminopimelate desuccinylase -
  GD578_RS15790 (GD578_16005) - 3273316..3273783 (-) 468 WP_002051358.1 hypothetical protein -
  GD578_RS15795 (GD578_16010) chpA 3273780..3278303 (-) 4524 WP_153518680.1 hybrid sensor histidine kinase/response regulator Regulator
  GD578_RS15800 (GD578_16015) - 3278451..3280532 (-) 2082 WP_002051535.1 methyl-accepting chemotaxis protein -
  GD578_RS15805 (GD578_16020) - 3280579..3281115 (-) 537 WP_002051357.1 chemotaxis protein CheW -
  GD578_RS15810 (GD578_16025) - 3281173..3281535 (-) 363 WP_002051151.1 PleD family two-component system response regulator -
  GD578_RS15815 (GD578_16030) pilG 3281562..3281945 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  GD578_RS15820 (GD578_16035) - 3282228..3282866 (+) 639 WP_002051486.1 hypothetical protein -

Sequence

Protein


Download         Length: 1507 a.a.        Molecular weight: 171483.95 Da        Isoelectric Point: 4.3569

>NTDB_id=395144 GD578_RS15795 WP_153518680.1 3273780..3278303(-) (chpA) [Acinetobacter nosocomialis strain AC1530]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWLQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLLNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVPMVEVFDSESEIFSEQELISEVLIDEVPAEIEPVLTELEVHDDQMVFDNVVAELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPI
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRTQRQQANKPEAGRIELNIQRQGAD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQHLEHQDILQLIFHPGLSTADQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTLRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLSEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=395144 GD578_RS15795 WP_153518680.1 3273780..3278303(-) (chpA) [Acinetobacter nosocomialis strain AC1530]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGTTGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATCCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGACGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCACAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTCTCTGAATTGTT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTACTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAAGCTGATG
AGCTACTTGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTTGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCGTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGACTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAAACTCTAACTTCCAACCTGTACCAATGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAGTACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGA
TGGTATTTGATAACGTTGTTGCTGAGTTAGCTACGCCAGTTGAAGCAATAACATCTGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGAAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCA
CTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGTTCAGAACCTGTGATGACCTTCATACAAGGTGATGGTACAGAACCACCACCAATT
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGCCAGTTCAGTCATACATTGGTTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAATCAGTTATCGAA
ATCTCTTGCTGAATCTGCTTCGGACTTAGTCGACTTTAAAAATACGTTGTCTCACAAGATCAGAGATACAGAAAGTCTGC
TTTTACAACAGTCACGAATTCAGGCAGAAATTCAAGAAGGTTTGATGCGAACACGATTAGTTCCTTTTTCACGGTTACTA
CCGCGTTTACAGCGAATTGTTCGTCAGACCTCTACTGCGTTGAACAGACCTGCTGAGCTTTTTGTAAATAATACCGAAGG
TGAACTAGATCGTAATATTTTAGAGCGTTTAGTAACACCGCTTGAGCATATGCTCAGAAATGCAATTGACCATGGCTTAG
AAGACAGAACACAGCGTCAGCAAGCTAATAAACCTGAAGCTGGGCGTATTGAACTTAATATTCAACGTCAAGGTGCAGAT
GTGGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTAGAAAAAGTACGTCAAAAAGCACTGCTTGCGGGTCTGAT
CAAACCGGAACAGCACTTGGAACACCAAGATATTTTACAACTGATTTTCCATCCGGGTTTAAGTACCGCAGATCAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTGGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGTTACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTGATGGTGAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATCGATCGGATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGCCCTAAAGAACTATTTGAATATGAAAATAAGCGATATCCATTACGTTATCTTTCTGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGTATTGGGGCAA
TTGCAGGTGCGACCATTTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTCAGTGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCAGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAGGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCGTTTGAAAGCGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1383-1494)

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(733-797)

Hpt domain (Hpt)

(199-282)

CheW-like domain (CheW)

(1222-1357)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1079-1215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.502

100

0.925

Multiple sequence alignment