Detailed information NTG0395140

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: GD578_RS08655
• Genome accession: NZ_CP045560
• Coordinates: 1770547..1771362 (+)
• Length: 271 a.a.
• NCBI ID: WP_025467812.1
• Uniprot ID: -
• Organism: Acinetobacter nosocomialis strain AC1530
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1765547..1776362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GD578_RS08620 (GD578_08720)	kdsB	1766072..1766833 (+)	762	WP_002050006.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GD578_RS08625 (GD578_08725)	-	1766845..1767825 (+)	981	WP_153518462.1	DNA polymerase III subunit delta'	-
GD578_RS08630 (GD578_08730)	-	1767838..1768179 (+)	342	WP_153518464.1	PilZ domain-containing protein	-
GD578_RS08635 (GD578_08735)	-	1768197..1768970 (+)	774	WP_002050255.1	TatD family hydrolase	-
GD578_RS08640 (GD578_08740)	-	1769008..1769616 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
GD578_RS08645 (GD578_08745)	-	1769626..1770177 (+)	552	WP_002049902.1	type II secretion system protein	-
GD578_RS08650 (GD578_08750)	xcpV	1770167..1770547 (+)	381	WP_002049794.1	type II secretion system minor pseudopilin GspI	Machinery gene
GD578_RS08655 (GD578_08755)	xcpW	1770547..1771362 (+)	816	WP_025467812.1	type II secretion system minor pseudopilin GspJ	Machinery gene
GD578_RS08660 (GD578_08760)	gspK	1771362..1772321 (+)	960	WP_002049780.1	type II secretion system minor pseudopilin GspK	-
GD578_RS08665 (GD578_08765)	-	1772551..1773147 (+)	597	WP_002050068.1	6-carboxytetrahydropterin synthase	-
GD578_RS08670 (GD578_08770)	ung	1773198..1773911 (+)	714	WP_002049829.1	uracil-DNA glycosylase	-
GD578_RS08675 (GD578_08775)	-	1773908..1775032 (+)	1125	WP_006580787.1	enoyl-CoA hydratase/isomerase family protein	-
GD578_RS08680 (GD578_08780)	tadA	1775039..1775542 (+)	504	WP_002050153.1	tRNA adenosine(34) deaminase TadA	-
GD578_RS08685 (GD578_08785)	-	1775612..1776052 (+)	441	WP_002050033.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30798.20 Da
• Isoelectric Point: 9.9903

>NTDB_id=395140 GD578_RS08655 WP_025467812.1 1770547..1771362(+) (xcpW) [Acinetobacter nosocomialis strain AC1530]
MIKNKNFRIQSIASHLRAQSGVIPTDYSGHSSSSYAQTKLRFREPHTRNMVSRLAVRSSNTRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDSLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKLYRLKYTNLNTSNNEQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQSNLSLSPQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=395140 GD578_RS08655 WP_025467812.1 1770547..1771362(+) (xcpW) [Acinetobacter nosocomialis strain AC1530]
ATGATAAAAAATAAGAATTTTCGAATTCAAAGCATTGCTTCTCATCTTAGAGCTCAGTCGGGTGTTATTCCGACTGACTA
CTCTGGGCATAGCTCTTCGTCTTACGCTCAGACAAAGCTTCGCTTTAGAGAGCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGTGCGATCGAGCAATACTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAATTGTTAGTTGCGATTGCTATC
TTTGCGGTCTTATCTTTATTGGGGTGGAAAATTTTCGATTACTTGCTTAAAGTTCGTGACCGTAATGCTGAACATGAAGT
GCATTTGTTTGAGTTACAAGATGCTTATCAACAAATTCTTCGTGATAGTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGCCAACTTCATCCAGCTTTAGAAATTGATAATCAAATTCTGCGTTTTAGCAAAGCAGGTGTAACGGATCCTTTAAAA
CAAGGTTTATCACCGTTTGAACGAATTGAATATCGTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAA
TTTGAATACTTCGAATAATGAGCAACCTTTATCGAGTACCTTGCTAAGTCAGGTTGACCAATATCAGATTATGGTTTTGA
CTCCACAAGAGGTAACAAAGTGGCCTGAGGTTAATATTGATCCAACAAAGCCTAACGAATTGAAAAAATTACCGAAAGGA
ATAAAAATTCAACTTACTGTAGCAGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAAGTAATTTATCGCTTTCCCC
ACAAGGTGGCTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	93.363	83.395	0.779