Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GE021_RS06430 Genome accession   NZ_CP053792
Coordinates   1285997..1286476 (-) Length   159 a.a.
NCBI ID   WP_093998940.1    Uniprot ID   A0A3P5YBD5
Organism   Streptococcus canis strain HL_77_1     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1280997..1291476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE021_RS06410 (GE021_006410) fbp54 1281382..1283034 (+) 1653 WP_164407213.1 Rqc2 family fibronectin-binding protein Fbp54 -
  GE021_RS06415 (GE021_006415) - 1283259..1283474 (+) 216 Protein_1238 IS3 family transposase -
  GE021_RS06420 (GE021_006420) - 1283535..1284782 (-) 1248 WP_164407216.1 tetratricopeptide repeat protein -
  GE021_RS06425 (GE021_006425) - 1284772..1285953 (-) 1182 WP_164407222.1 AI-2E family transporter -
  GE021_RS06430 (GE021_006430) mutX 1285997..1286476 (-) 480 WP_093998940.1 8-oxo-dGTP diphosphatase Machinery gene
  GE021_RS06435 (GE021_006435) - 1286565..1287584 (+) 1020 WP_164407228.1 lactonase family protein -
  GE021_RS06440 (GE021_006440) - 1287640..1287831 (+) 192 WP_164407234.1 hypothetical protein -
  GE021_RS06445 (GE021_006445) rfbB 1288208..1289254 (-) 1047 WP_164407247.1 dTDP-glucose 4,6-dehydratase -
  GE021_RS06450 (GE021_006450) - 1289482..1290075 (-) 594 WP_125074677.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  GE021_RS06455 (GE021_006455) rfbA 1290075..1290944 (-) 870 WP_003043910.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18732.03 Da        Isoelectric Point: 4.3727

>NTDB_id=394624 GE021_RS06430 WP_093998940.1 1285997..1286476(-) (mutX) [Streptococcus canis strain HL_77_1]
MTQLATICYIDNGDALLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTEFEGELISDEESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYDQNNQLIDKSVTFYK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=394624 GE021_RS06430 WP_093998940.1 1285997..1286476(-) (mutX) [Streptococcus canis strain HL_77_1]
ATGACCCAATTAGCAACCATTTGTTACATAGATAATGGCGATGCTTTGCTGTTGTTGCACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGCAAGTGGATTTCCGTTGGGGGTAAGCTTGAAGCAGGTGAAACCCCAGACGAGTGTGCCCGCCGTGAAA
TTTTAGAAGAAACTCATTTGACGGTTAAAAAAATGGATTTTAAGGGAATGATTACTTTCCCAGAATTTACCCCTGGTCAT
GATTGGTACACCTATGTGTTTAAAGTAACTGAGTTTGAAGGAGAACTAATCTCAGATGAAGAATCCCGGGAAGGGACCTT
GGAATGGGTGCCTTACGATCAGGTATTGGAAAAACCAACCTGGGAAGGGGACTATGACATTTTTAAATGGATTTTAGAAG
ACCGTCCTTTTTTCTCTGCCAAATTTACTTACGACCAAAACAACCAACTCATTGATAAATCCGTGACGTTTTATAAATGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3P5YBD5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

100

0.711