Detailed information NTG0394522

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: FPL20_RS19275
• Genome accession: NZ_CP045478
• Coordinates: 3647159..3648112 (-)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain JD-014
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 3642159..3653112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPL20_RS19245 (FPL20_GE03677)	appD	3642278..3643264 (-)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-
FPL20_RS19250 (FPL20_GE03678)	yjaZ	3643456..3644241 (-)	786	WP_003232967.1	DUF2268 domain-containing protein	-
FPL20_RS19255 (FPL20_GE03679)	fabF	3644317..3645558 (-)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
FPL20_RS19260 (FPL20_GE03680)	fabH	3645581..3646519 (-)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
FPL20_RS19265 (FPL20_GE03681)	yjzB	3646684..3646923 (+)	240	WP_003232972.1	spore coat protein YjzB	-
FPL20_RS19270 (FPL20_GE03682)	comZ	3646953..3647144 (-)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
FPL20_RS19275 (FPL20_GE03683)	med	3647159..3648112 (-)	954	WP_003245494.1	transcriptional regulator Med	Regulator
FPL20_RS19280 (FPL20_GE03684)	-	3648203..3648760 (-)	558	WP_003232974.1	hypothetical protein	-
FPL20_RS19285 (FPL20_GE03685)	-	3648842..3649576 (-)	735	WP_003245223.1	hypothetical protein	-
FPL20_RS19290 (FPL20_GE03686)	yjzD	3649825..3650010 (+)	186	WP_003245236.1	YjzD family protein	-
FPL20_RS19295 (FPL20_GE03687)	yjzC	3650056..3650235 (-)	180	WP_003245356.1	YjzC family protein	-
FPL20_RS19300 (FPL20_GE03688)	argF	3650321..3651280 (-)	960	WP_003232980.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=394522 FPL20_RS19275 WP_003245494.1 3647159..3648112(-) (med) [Bacillus subtilis strain JD-014]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=394522 FPL20_RS19275 WP_003245494.1 3647159..3648112(-) (med) [Bacillus subtilis strain JD-014]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1