Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GE022_RS04715 Genome accession   NZ_CP053790
Coordinates   959995..960660 (+) Length   221 a.a.
NCBI ID   WP_164405343.1    Uniprot ID   -
Organism   Streptococcus canis strain HL_77_2     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 954995..965660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE022_RS04690 (GE022_004680) - 955535..955821 (-) 287 Protein_877 [citrate (pro-3S)-lyase] ligase -
  GE022_RS04695 (GE022_004685) - 955905..956075 (-) 171 WP_164405340.1 hypothetical protein -
  GE022_RS04700 (GE022_004690) - 956242..957204 (+) 963 WP_093998632.1 S41 family peptidase -
  GE022_RS04705 (GE022_004695) - 957242..957994 (+) 753 WP_164405341.1 ABC transporter ATP-binding protein -
  GE022_RS04710 (GE022_004700) - 957996..959951 (+) 1956 WP_164405342.1 FtsX-like permease family protein -
  GE022_RS04715 (GE022_004705) braR 959995..960660 (+) 666 WP_164405343.1 DNA-binding response regulator Regulator
  GE022_RS04720 (GE022_004710) - 960657..961604 (+) 948 WP_164405344.1 sensor histidine kinase -
  GE022_RS04725 (GE022_004715) - 961670..962212 (-) 543 WP_164228010.1 Gx transporter family protein -
  GE022_RS04730 (GE022_004720) - 962369..964261 (+) 1893 WP_164405345.1 NAD(P)/FAD-dependent oxidoreductase -
  GE022_RS04735 (GE022_004725) - 964340..965338 (+) 999 WP_164405346.1 polyprenyl synthetase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25541.14 Da        Isoelectric Point: 5.0899

>NTDB_id=394513 GE022_RS04715 WP_164405343.1 959995..960660(+) (braR) [Streptococcus canis strain HL_77_2]
MTKHDKIYIIEDDTTILSLLDNHLSQAYHVRTVTNFRDIKQEVLTYQPDLILMDITLPFFNGFYWTTEIRKQSTVPIIFI
SSSNDEMDTVMALNMGGDDFVSKPFSLTILDAKIAAFLRRSQQFTSDDISLDQFKLHFDGTLSNGEDTVTLSPTEHKMLT
ILMTRNQEIVSKEEILEQLWENDNFIDHNTLNVNMTRLRKKIGSIGFDRIHTVRGVGYLIK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=394513 GE022_RS04715 WP_164405343.1 959995..960660(+) (braR) [Streptococcus canis strain HL_77_2]
ATGACAAAACACGACAAAATTTATATTATCGAAGATGATACAACAATCTTATCTCTTCTTGACAATCACCTTAGCCAAGC
CTACCACGTTAGGACTGTTACTAATTTTAGGGATATTAAACAAGAAGTGCTGACTTACCAACCAGATCTTATTTTAATGG
ATATTACTCTTCCATTTTTCAATGGTTTTTATTGGACGACTGAAATCCGAAAGCAGTCTACCGTTCCTATTATTTTTATT
TCCAGCAGCAATGATGAAATGGACACGGTTATGGCCCTCAATATGGGAGGAGATGATTTTGTATCTAAACCTTTTTCATT
AACCATTTTAGATGCCAAAATAGCAGCTTTTTTACGGCGTTCCCAACAGTTTACCAGTGATGATATTAGCCTTGATCAGT
TCAAGCTTCATTTTGATGGTACCTTATCCAATGGGGAAGATACGGTCACTCTTTCACCGACAGAGCACAAAATGCTGACC
ATTTTGATGACCAGAAATCAAGAAATTGTTTCCAAAGAGGAAATCTTGGAACAACTATGGGAAAACGATAACTTTATTGA
TCATAACACGCTCAATGTTAACATGACACGATTACGTAAAAAAATTGGGAGCATTGGTTTCGATCGTATTCATACTGTTA
GGGGAGTGGGGTACCTCATCAAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-219)

Response regulator receiver domain (Response_reg)

(7-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

46.33

98.643

0.457

Multiple sequence alignment