Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   FPL20_RS17775 Genome accession   NZ_CP045478
Coordinates   3379713..3380177 (+) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain JD-014     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3374713..3385177
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS17755 (FPL20_GE03382) fadH 3375901..3376665 (-) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -
  FPL20_RS17760 (FPL20_GE03383) ppeE 3376808..3377668 (+) 861 WP_003232400.1 metallophosphoesterase -
  FPL20_RS17765 (FPL20_GE03384) ltdD 3377725..3378219 (+) 495 WP_010886500.1 L,D-transpeptidase family protein -
  FPL20_RS17770 (FPL20_GE03385) ykuC 3378295..3379587 (+) 1293 WP_003245267.1 MFS transporter -
  FPL20_RS17775 (FPL20_GE03386) kre 3379713..3380177 (+) 465 WP_003232406.1 YkyB family protein Regulator
  FPL20_RS17780 (FPL20_GE03387) cheV 3380221..3381132 (-) 912 WP_009967126.1 chemotaxis protein CheV -
  FPL20_RS17785 (FPL20_GE03388) - 3381336..3381497 (+) 162 WP_003245246.1 hypothetical protein -
  FPL20_RS17790 (FPL20_GE03389) dapX 3381699..3382880 (+) 1182 WP_003232415.1 aminotransferase A -
  FPL20_RS17795 (FPL20_GE03390) kinA 3382891..3384711 (-) 1821 WP_003245779.1 sporulation histidine kinase KinA -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=394513 FPL20_RS17775 WP_003232406.1 3379713..3380177(+) (kre) [Bacillus subtilis strain JD-014]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=394513 FPL20_RS17775 WP_003232406.1 3379713..3380177(+) (kre) [Bacillus subtilis strain JD-014]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment