Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GE022_RS02680 | Genome accession | NZ_CP053790 |
| Coordinates | 530278..530940 (+) | Length | 220 a.a. |
| NCBI ID | WP_164405774.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_77_2 | ||
| Function | dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 525278..535940
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE022_RS02660 (GE022_002645) | - | 526044..528044 (+) | 2001 | WP_164405776.1 | potassium transporter Kup | - |
| GE022_RS02665 (GE022_002650) | - | 528173..528451 (-) | 279 | WP_003044201.1 | GIY-YIG nuclease family protein | - |
| GE022_RS02670 (GE022_002655) | - | 528441..529217 (-) | 777 | WP_159304866.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GE022_RS02675 (GE022_002660) | - | 529335..530075 (+) | 741 | WP_164405775.1 | lysophospholipid acyltransferase family protein | - |
| GE022_RS02680 (GE022_002665) | comEA | 530278..530940 (+) | 663 | WP_164405774.1 | ComEA family DNA-binding protein | Machinery gene |
| GE022_RS02685 (GE022_002670) | comEC/celB | 530921..533164 (+) | 2244 | WP_164405773.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| GE022_RS02690 (GE022_002675) | holA | 533244..534284 (+) | 1041 | WP_164405772.1 | DNA polymerase III subunit delta | - |
| GE022_RS02695 (GE022_002680) | sodA | 534381..534986 (+) | 606 | WP_003044189.1 | superoxide dismutase SodA | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 24243.98 Da Isoelectric Point: 5.8282
>NTDB_id=394498 GE022_RS02680 WP_164405774.1 530278..530940(+) (comEA) [Streptococcus canis strain HL_77_2]
MLDELLTKGKNLLRERYSLPALPSLLFGLFLILGLSLLFWGNRQSKTDIPALREISSVKQQVSEEKKEIQEDSSILVDLK
GAVQKEGVYKLAASSRVRDVIELAGGLTSEADKHAINLAEKLVDEQVVYVPKQGEEISVLPTASVSGKKETASKDQVKVH
INKASLEELQHIPGIGAKKAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD
MLDELLTKGKNLLRERYSLPALPSLLFGLFLILGLSLLFWGNRQSKTDIPALREISSVKQQVSEEKKEIQEDSSILVDLK
GAVQKEGVYKLAASSRVRDVIELAGGLTSEADKHAINLAEKLVDEQVVYVPKQGEEISVLPTASVSGKKETASKDQVKVH
INKASLEELQHIPGIGAKKAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD
Nucleotide
Download Length: 663 bp
>NTDB_id=394498 GE022_RS02680 WP_164405774.1 530278..530940(+) (comEA) [Streptococcus canis strain HL_77_2]
ATGTTAGATGAATTATTAACTAAAGGAAAAAACTTGTTGAGGGAGAGGTACTCTCTTCCAGCTTTACCCAGCCTTTTATT
TGGTCTTTTTCTGATACTAGGCTTAAGTCTTTTGTTCTGGGGAAATAGGCAGAGCAAGACAGATATTCCTGCTTTGAGAG
AAATATCGTCTGTAAAACAGCAAGTCAGTGAGGAAAAAAAGGAAATTCAAGAAGATAGCAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAGGAGGGAGTTTATAAGCTTGCTGCTAGCAGCCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATCTTGCAGAAAAACTAGTTGATGAGCAGGTTGTTTATGTACCTAAGCAAG
GAGAAGAGATTTCTGTGCTACCAACAGCATCAGTTTCTGGAAAAAAAGAAACTGCCAGCAAGGATCAGGTAAAGGTTCAT
ATTAATAAGGCTAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAAAGCTCAGGATATTATCGATATGAG
AGATAAGTTAGGTGGCTTTAAAGCGTTAGAAGATCTTCGTCAAGTTTCGGGTATTGGCGAAAAAACGCTTGAGAAATTAA
AAGATGACATTTTCTTGGACTAA
ATGTTAGATGAATTATTAACTAAAGGAAAAAACTTGTTGAGGGAGAGGTACTCTCTTCCAGCTTTACCCAGCCTTTTATT
TGGTCTTTTTCTGATACTAGGCTTAAGTCTTTTGTTCTGGGGAAATAGGCAGAGCAAGACAGATATTCCTGCTTTGAGAG
AAATATCGTCTGTAAAACAGCAAGTCAGTGAGGAAAAAAAGGAAATTCAAGAAGATAGCAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAGGAGGGAGTTTATAAGCTTGCTGCTAGCAGCCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATCTTGCAGAAAAACTAGTTGATGAGCAGGTTGTTTATGTACCTAAGCAAG
GAGAAGAGATTTCTGTGCTACCAACAGCATCAGTTTCTGGAAAAAAAGAAACTGCCAGCAAGGATCAGGTAAAGGTTCAT
ATTAATAAGGCTAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAAAGCTCAGGATATTATCGATATGAG
AGATAAGTTAGGTGGCTTTAAAGCGTTAGAAGATCTTCGTCAAGTTTCGGGTATTGGCGAAAAAACGCTTGAGAAATTAA
AAGATGACATTTTCTTGGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Lactococcus lactis subsp. cremoris KW2 |
53.642 |
68.636 |
0.368 |