Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   FPL20_RS01360 Genome accession   NZ_CP045478
Coordinates   248262..248402 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain JD-014     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 243262..253402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FPL20_RS01355 - 247144..248316 (-) 1173 Protein_259 condensation domain-containing protein -
  FPL20_RS01360 comS 248262..248402 (-) 141 WP_010886404.1 competence protein ComS Regulator
  FPL20_RS01365 srfAB 248446..251538 (-) 3093 Protein_261 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=394455 FPL20_RS01360 WP_010886404.1 248262..248402(-) (comS) [Bacillus subtilis strain JD-014]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=394455 FPL20_RS01360 WP_010886404.1 248262..248402(-) (comS) [Bacillus subtilis strain JD-014]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment