Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   HICON_RS02515 Genome accession   NC_014922
Coordinates   509828..510124 (+) Length   98 a.a.
NCBI ID   WP_005650837.1    Uniprot ID   Q4QMQ7
Organism   Haemophilus influenzae F3047     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 504828..515124
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HICON_RS02505 (HICON_07360) - 506263..509206 (+) 2944 Protein_485 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor -
  HICON_RS02510 (HICON_07361) - 509476..509835 (+) 360 WP_005694481.1 type II toxin-antitoxin system RelE/ParE family toxin -
  HICON_RS02515 (HICON_07362) HI0659 509828..510124 (+) 297 WP_005650837.1 helix-turn-helix domain-containing protein Machinery gene
  HICON_RS02520 (HICON_07370) - 510285..512201 (+) 1917 WP_013527363.1 ABC transporter ATP-binding protein -
  HICON_RS02525 (HICON_07380) - 512211..512747 (+) 537 WP_013527364.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein -
  HICON_RS02530 (HICON_07390) - 512763..513314 (+) 552 WP_013527365.1 Sua5/YciO/YrdC/YwlC family protein -
  HICON_RS02535 (HICON_07400) aroE 513318..514124 (+) 807 WP_013527366.1 shikimate dehydrogenase -
  HICON_RS02540 (HICON_07410) - 514136..514888 (+) 753 WP_006995313.1 DUF3800 domain-containing protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 11092.94 Da        Isoelectric Point: 10.3139

>NTDB_id=39444 HICON_RS02515 WP_005650837.1 509828..510124(+) (HI0659) [Haemophilus influenzae F3047]
MNKISPLGSNWNEFEQQIFNEEEIRESNLRVALIKELITSRQQLGISQKQLETLSGVKQPMIARIEKGQTNPQLETLLKL
LAPLGKTLSIVPLRVKNA

Nucleotide


Download         Length: 297 bp        

>NTDB_id=39444 HICON_RS02515 WP_005650837.1 509828..510124(+) (HI0659) [Haemophilus influenzae F3047]
ATGAATAAAATCAGCCCATTAGGTTCAAATTGGAATGAGTTTGAACAGCAAATTTTCAATGAAGAAGAAATCCGAGAAAG
TAATTTGCGTGTAGCCTTAATTAAAGAATTGATTACTTCTCGCCAGCAACTTGGGATTTCCCAAAAACAACTTGAAACCT
TAAGCGGTGTGAAGCAACCTATGATTGCACGCATTGAAAAAGGACAAACGAATCCTCAGCTTGAAACGTTGTTAAAATTG
CTTGCTCCTTTAGGGAAAACCCTGTCGATTGTTCCTCTAAGGGTAAAAAATGCCTAA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(41-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q4QMQ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

100

100

1

Multiple sequence alignment