Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   GAY69_RS11230 Genome accession   NZ_CP045472
Coordinates   2328751..2329467 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain ZY05     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2323751..2334467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GAY69_RS11210 (GAY69_11410) - 2324845..2325795 (+) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -
  GAY69_RS11215 (GAY69_11415) - 2325944..2327428 (+) 1485 WP_000141422.1 sucrose-6-phosphate hydrolase -
  GAY69_RS11220 (GAY69_11420) - 2327425..2328384 (+) 960 WP_001253300.1 carbohydrate kinase -
  GAY69_RS11225 (GAY69_11425) - 2328572..2328679 (-) 108 WP_031844951.1 hypothetical protein -
  GAY69_RS11230 (GAY69_11430) agrA 2328751..2329467 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  GAY69_RS11235 (GAY69_11435) - 2329486..2330778 (-) 1293 WP_031844950.1 GHKL domain-containing protein -
  GAY69_RS11240 (GAY69_11440) - 2330803..2330943 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  GAY69_RS11245 (GAY69_11445) agrB 2330940..2331509 (-) 570 WP_001105712.1 accessory gene regulator AgrB -
  GAY69_RS14245 hld 2331799..2331879 (+) 81 WP_000046023.1 delta-hemolysin -
  GAY69_RS11255 (GAY69_11455) - 2332478..2333263 (-) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  GAY69_RS11260 (GAY69_11460) - 2333624..2334250 (-) 627 WP_000522383.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=394431 GAY69_RS11230 WP_000688492.1 2328751..2329467(-) (agrA) [Staphylococcus aureus strain ZY05]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=394431 GAY69_RS11230 WP_000688492.1 2328751..2329467(-) (agrA) [Staphylococcus aureus strain ZY05]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACGTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment