Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   GEA57_RS07640 Genome accession   NZ_CP045451
Coordinates   1637737..1638363 (+) Length   208 a.a.
NCBI ID   WP_017384804.1    Uniprot ID   A0AA37AJW2
Organism   Enterobacter hormaechei strain 14320055602     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1632737..1643363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GEA57_RS07620 - 1633136..1634896 (-) 1761 WP_047365680.1 AAA family ATPase -
  GEA57_RS07625 matP 1635083..1635535 (+) 453 WP_006809347.1 macrodomain Ter protein MatP -
  GEA57_RS07630 ompA 1635601..1636653 (-) 1053 WP_108376575.1 porin OmpA -
  GEA57_RS07635 sulA 1637010..1637519 (-) 510 WP_026094322.1 SOS-induced cell division inhibitor SulA -
  GEA57_RS07640 sxy/tfoX 1637737..1638363 (+) 627 WP_017384804.1 TfoX/Sxy family DNA transformation protein Regulator
  GEA57_RS07645 yccS 1638320..1640482 (-) 2163 WP_015570895.1 YccS family putative transporter -
  GEA57_RS07650 - 1640501..1640947 (-) 447 WP_015570894.1 YccF domain-containing protein -
  GEA57_RS07655 helD 1641070..1643124 (+) 2055 WP_032653161.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24018.63 Da        Isoelectric Point: 9.4592

>NTDB_id=394200 GEA57_RS07640 WP_017384804.1 1637737..1638363(+) (sxy/tfoX) [Enterobacter hormaechei strain 14320055602]
MKKISYDRIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELMEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=394200 GEA57_RS07640 WP_017384804.1 1637737..1638363(+) (sxy/tfoX) [Enterobacter hormaechei strain 14320055602]
ATGAAAAAGATATCTTATGATCGGATTTATCAATCTCAGGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCCTCCTCTTTTCTGACCCTGATGAAACGAGGACGGCCAGTGCTGCTTAAT
TACTACCGTGTGGATGAAGGTCTGTGGCAAAACAGGGAAAAGCTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAATCGGCTTAAGGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCTAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCCATCGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTATGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572

Multiple sequence alignment