Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   GCU76_RS22990 Genome accession   NZ_CP045425
Coordinates   394707..394847 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain JAAA     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 389707..399847
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS22985 srfAB 391571..394663 (+) 3093 Protein_353 surfactin non-ribosomal peptide synthetase SrfAB -
  GCU76_RS22990 comS 394707..394847 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=394025 GCU76_RS22990 WP_225910706.1 394707..394847(+) (comS) [Bacillus subtilis strain JAAA]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=394025 GCU76_RS22990 WP_225910706.1 394707..394847(+) (comS) [Bacillus subtilis strain JAAA]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment