Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GCU76_RS07725 Genome accession   NZ_CP045425
Coordinates   1459357..1459821 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain JAAA     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454357..1464821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS07705 kinA 1454824..1456644 (+) 1821 WP_014476652.1 sporulation histidine kinase KinA -
  GCU76_RS07710 dapX 1456654..1457835 (-) 1182 WP_014476653.1 aminotransferase A -
  GCU76_RS07715 - 1458037..1458198 (-) 162 WP_003245246.1 hypothetical protein -
  GCU76_RS07720 cheV 1458402..1459313 (+) 912 WP_041054806.1 chemotaxis protein CheV -
  GCU76_RS07725 kre 1459357..1459821 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GCU76_RS07730 ykuC 1459947..1461239 (-) 1293 WP_017697269.1 MFS transporter -
  GCU76_RS07735 ltdD 1461315..1461809 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  GCU76_RS07740 ppeE 1461866..1462726 (-) 861 WP_017697271.1 metallophosphoesterase -
  GCU76_RS07745 fadH 1462869..1463633 (+) 765 WP_017697272.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=393979 GCU76_RS07725 WP_003232406.1 1459357..1459821(-) (kre) [Bacillus subtilis strain JAAA]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=393979 GCU76_RS07725 WP_003232406.1 1459357..1459821(-) (kre) [Bacillus subtilis strain JAAA]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment