Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   GCU76_RS06180 Genome accession   NZ_CP045425
Coordinates   1184810..1185763 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain JAAA     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1179810..1190763
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GCU76_RS06155 argF 1181641..1182600 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  GCU76_RS06160 yjzC 1182686..1182865 (+) 180 WP_003245356.1 YjzC family protein -
  GCU76_RS06165 yjzD 1182912..1183097 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  GCU76_RS06170 - 1183346..1184080 (+) 735 WP_041340422.1 hypothetical protein -
  GCU76_RS06175 - 1184162..1184719 (+) 558 WP_041056486.1 hypothetical protein -
  GCU76_RS06180 med 1184810..1185763 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  GCU76_RS06185 comZ 1185778..1185969 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  GCU76_RS06190 yjzB 1185999..1186235 (-) 237 WP_080333447.1 spore coat protein YjzB -
  GCU76_RS06195 fabH 1186400..1187338 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  GCU76_RS06200 fabF 1187361..1188602 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  GCU76_RS06205 yjaZ 1188678..1189463 (+) 786 WP_033883592.1 DUF2268 domain-containing protein -
  GCU76_RS06210 appD 1189655..1190641 (+) 987 WP_014663522.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=393970 GCU76_RS06180 WP_014476425.1 1184810..1185763(+) (med) [Bacillus subtilis strain JAAA]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=393970 GCU76_RS06180 WP_014476425.1 1184810..1185763(+) (med) [Bacillus subtilis strain JAAA]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTCAGCGGAGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAACACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACTGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997

Multiple sequence alignment