Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | FIU87_RS17620 | Genome accession | NZ_CP045403 |
| Coordinates | 3407221..3407556 (+) | Length | 111 a.a. |
| NCBI ID | WP_152445776.1 | Uniprot ID | A0A5P9HUV7 |
| Organism | Bacillus sp. THAF10 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
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Genomic Context
Location: 3402221..3412556
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU87_RS17600 (FIU87_18055) | smpB | 3402511..3402978 (-) | 468 | WP_152445773.1 | SsrA-binding protein SmpB | - |
| FIU87_RS17605 (FIU87_18060) | rnr | 3403252..3405609 (-) | 2358 | WP_152445774.1 | ribonuclease R | - |
| FIU87_RS17610 (FIU87_18065) | - | 3405652..3406392 (-) | 741 | WP_152445775.1 | carboxylesterase | - |
| FIU87_RS17615 (FIU87_18070) | - | 3406980..3407129 (+) | 150 | WP_253905454.1 | anti-repressor SinI family protein | - |
| FIU87_RS17620 (FIU87_18075) | sinR | 3407221..3407556 (+) | 336 | WP_152445776.1 | helix-turn-helix domain-containing protein | Regulator |
| FIU87_RS17625 (FIU87_18085) | - | 3407992..3408606 (-) | 615 | WP_152445777.1 | LPXTG cell wall anchor domain-containing protein | - |
| FIU87_RS17630 (FIU87_18090) | - | 3408683..3409471 (-) | 789 | WP_152445778.1 | TasA family protein | - |
| FIU87_RS17635 (FIU87_18095) | - | 3409526..3410035 (-) | 510 | WP_152445779.1 | TasA family protein | - |
| FIU87_RS17640 (FIU87_18100) | sipW | 3410114..3410704 (-) | 591 | WP_253905455.1 | signal peptidase I SipW | - |
| FIU87_RS17645 (FIU87_18105) | tapA | 3410724..3411551 (-) | 828 | WP_152445781.1 | amyloid fiber anchoring/assembly protein TapA | - |
| FIU87_RS17650 (FIU87_18110) | - | 3411783..3412166 (+) | 384 | WP_152445782.1 | helix-turn-helix domain-containing protein | - |
| FIU87_RS17655 (FIU87_18115) | - | 3412163..3412297 (+) | 135 | WP_152445783.1 | anti-repressor SinI family protein | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12867.54 Da Isoelectric Point: 7.0194
>NTDB_id=393818 FIU87_RS17620 WP_152445776.1 3407221..3407556(+) (sinR) [Bacillus sp. THAF10]
MIGERIKKYREQRKLSMSELAERAGVAKSYLSSIERNLQSNPSVQFLEKISSVLGVSVNTLLHDENDAQAKENLDREWAS
LVKEAMDSGVTKDQFKEFLEFNRWKMNQENK
MIGERIKKYREQRKLSMSELAERAGVAKSYLSSIERNLQSNPSVQFLEKISSVLGVSVNTLLHDENDAQAKENLDREWAS
LVKEAMDSGVTKDQFKEFLEFNRWKMNQENK
Nucleotide
Download Length: 336 bp
>NTDB_id=393818 FIU87_RS17620 WP_152445776.1 3407221..3407556(+) (sinR) [Bacillus sp. THAF10]
ATGATTGGTGAACGAATAAAAAAATATAGAGAACAAAGAAAGCTGTCCATGTCCGAACTAGCCGAACGCGCTGGTGTAGC
TAAATCATACCTTAGTTCCATCGAACGGAACTTACAATCTAATCCTTCCGTTCAATTTCTAGAAAAAATCTCTTCTGTGC
TTGGTGTATCTGTCAACACCCTTTTACATGACGAAAATGATGCACAAGCTAAAGAAAACCTCGACCGAGAATGGGCCTCC
CTTGTAAAAGAAGCCATGGACTCCGGCGTTACGAAGGATCAATTTAAAGAGTTCTTAGAATTTAATAGATGGAAAATGAA
TCAAGAAAACAAATAA
ATGATTGGTGAACGAATAAAAAAATATAGAGAACAAAGAAAGCTGTCCATGTCCGAACTAGCCGAACGCGCTGGTGTAGC
TAAATCATACCTTAGTTCCATCGAACGGAACTTACAATCTAATCCTTCCGTTCAATTTCTAGAAAAAATCTCTTCTGTGC
TTGGTGTATCTGTCAACACCCTTTTACATGACGAAAATGATGCACAAGCTAAAGAAAACCTCGACCGAGAATGGGCCTCC
CTTGTAAAAGAAGCCATGGACTCCGGCGTTACGAAGGATCAATTTAAAGAGTTCTTAGAATTTAATAGATGGAAAATGAA
TCAAGAAAACAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
61.111 |
97.297 |
0.595 |