Detailed information NTG0393810

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FIU87_RS14675
• Genome accession: NZ_CP045403
• Coordinates: 2797427..2799826 (-)
• Length: 799 a.a.
• NCBI ID: WP_152445283.1
• Uniprot ID: A0A5P9HRS7
• Organism: Bacillus sp. THAF10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2792427..2804826

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIU87_RS14645 (FIU87_15055)	-	2792873..2794243 (-)	1371	WP_253905432.1	NAD(P)-dependent oxidoreductase	-
FIU87_RS14650 (FIU87_15060)	-	2794543..2795433 (-)	891	WP_152445279.1	nitrilase-related carbon-nitrogen hydrolase	-
FIU87_RS14655 (FIU87_15065)	-	2795615..2795770 (-)	156	WP_152445280.1	YrzQ family protein	-
FIU87_RS14660 (FIU87_15070)	-	2795794..2795988 (-)	195	WP_152446588.1	hypothetical protein	-
FIU87_RS14665 (FIU87_15075)	-	2796004..2796477 (-)	474	WP_152445281.1	PRC-barrel domain-containing protein	-
FIU87_RS14670 (FIU87_15080)	-	2796663..2797214 (+)	552	WP_152445282.1	hypothetical protein	-
FIU87_RS14675 (FIU87_15085)	recD2	2797427..2799826 (-)	2400	WP_152445283.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FIU87_RS14680 (FIU87_15090)	-	2799845..2800498 (-)	654	WP_152445284.1	tetratricopeptide repeat protein	-
FIU87_RS14685 (FIU87_15095)	mnmA	2800591..2801706 (-)	1116	WP_152445285.1	tRNA 2-thiouridine(34) synthase MnmA	-
FIU87_RS14690 (FIU87_15100)	-	2801722..2802867 (-)	1146	WP_152445286.1	cysteine desulfurase family protein	-
FIU87_RS14695 (FIU87_15105)	-	2802904..2803320 (-)	417	WP_152445287.1	Rrf2 family transcriptional regulator	-
FIU87_RS14700 (FIU87_15110)	-	2803349..2804023 (-)	675	WP_152445288.1	YitT family protein	-

Sequence

Protein

• Length: 799 a.a.
• Molecular weight: 89848.41 Da
• Isoelectric Point: 4.9395

>NTDB_id=393810 FIU87_RS14675 WP_152445283.1 2797427..2799826(-) (recD2) [Bacillus sp. THAF10]
MNDQKQQASLDLFEENEKFMKGSHLVTIFHNESNLYSVVRIRVSETNVAYEEKEAVVTGYFPRIHEEETYIFFGQMKDHP
RFGMQFHVEHFRKDIPQTKQGIVQYLSSDLFSGIGRKTAEKIADALGENAISKILENPSVLDSIPKLSGDKAKLLYDSLM
EHQGLEQVLIALSQFGFGPQLSMKIYQAYKDQTLEILQQNPYQLVETVEGIGFARADELGNHFGISGNHPDRIKAGCLYI
LEQFSMQDGHCYVKKEQLVEAVARLLNEKQRNLVPEADISRELLKMAEEGKIKIEEGRVYLLSLYFSEQGVVTNIKRVLE
QTQYAEQFPESEFLLALGELEDRLKVQYAPSQKEAIQQALLSPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLDPNDYS
KDDPFPVMLAAPTGRAAKRMSESTGLPSLTIHRLLGWNGSEGFMHDEENPISCKLLIVDEMSMVDIWLANQLFKSLPEDI
QVVLVGDEDQLPSVGPGQVLKDLLSSTVIPTVKLTDIYRQADGSSIIELAHDMKDGVVPANIAQAQKDRSFIKCQQAQIL
DVVKKVCANAQTKGYSARDIQVLAPMYRGNAGIDKLNEILQELFNPKSPNRRELAFGSIVYRTGDKVLQLVNQPESNVFN
GDIGEVVSIFYAKENTEKQDMVIVSFDGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRSKKFLILCGEEDALRLGVGRADEQARQTSLKQKLANKHSVDSLEEENPDILKEIPFWHDANIGMENISPYDFLEEE

Nucleotide

• Length: 2400 bp

>NTDB_id=393810 FIU87_RS14675 WP_152445283.1 2797427..2799826(-) (recD2) [Bacillus sp. THAF10]
ATGAATGACCAAAAGCAACAAGCATCTCTTGATCTTTTTGAGGAAAATGAAAAGTTTATGAAGGGATCGCACTTGGTGAC
CATTTTTCACAATGAATCTAACTTGTATTCAGTTGTGCGAATCCGAGTGAGTGAGACAAATGTTGCTTATGAGGAAAAAG
AAGCGGTCGTAACTGGATATTTCCCCCGCATTCATGAAGAAGAAACCTACATATTTTTTGGGCAAATGAAAGATCATCCG
CGCTTTGGAATGCAGTTTCATGTGGAGCATTTTCGAAAAGATATCCCGCAAACGAAACAAGGCATTGTTCAATATCTTTC
CAGCGACCTTTTTTCTGGGATAGGTAGGAAAACAGCCGAAAAAATTGCCGATGCACTTGGTGAAAACGCCATTTCCAAGA
TTTTAGAAAACCCATCCGTGTTGGACTCCATTCCCAAGCTTTCTGGAGATAAAGCCAAATTACTTTATGATTCCTTAATG
GAGCATCAGGGTCTTGAACAAGTCTTAATTGCTCTATCTCAATTCGGCTTTGGACCACAGCTATCGATGAAAATTTATCA
GGCCTATAAGGATCAAACACTGGAGATCTTGCAGCAGAATCCCTATCAGCTTGTGGAGACTGTAGAGGGAATTGGTTTTG
CGAGGGCAGATGAGCTTGGGAATCACTTCGGCATTTCAGGCAACCATCCCGACCGCATCAAGGCTGGCTGTCTATACATA
TTAGAGCAATTTTCAATGCAGGACGGTCACTGTTATGTAAAAAAAGAGCAGCTTGTTGAAGCAGTGGCAAGACTTTTAAA
TGAGAAGCAGCGAAATCTTGTACCGGAAGCGGATATTTCAAGAGAGTTACTGAAAATGGCGGAGGAAGGCAAAATAAAGA
TCGAGGAAGGCAGAGTGTATTTGCTCAGTCTTTATTTTTCCGAGCAGGGTGTTGTCACCAATATAAAAAGGGTGCTCGAA
CAAACACAATATGCAGAACAGTTCCCAGAATCAGAGTTTTTACTAGCCTTAGGAGAGCTTGAGGACCGTTTAAAAGTCCA
ATATGCCCCTTCTCAAAAGGAAGCCATTCAACAGGCATTACTGTCACCGATGCTTCTTTTAACTGGCGGACCAGGGACAG
GGAAAACTACGGTTATAAAAGGGATAGTGGAATTGTACGCAGATTTACATGGCTGTTCCTTAGATCCCAATGATTATAGC
AAAGATGATCCATTTCCAGTGATGCTTGCAGCTCCAACAGGACGTGCCGCGAAGCGAATGAGTGAATCCACAGGCTTGCC
ATCCTTAACGATACACCGTCTCCTTGGATGGAATGGATCAGAAGGCTTTATGCATGATGAAGAAAATCCGATTTCCTGTA
AGCTACTGATTGTCGATGAAATGTCAATGGTGGATATTTGGCTTGCCAATCAATTGTTCAAATCACTTCCAGAAGATATC
CAGGTTGTCTTAGTAGGAGATGAAGATCAGCTCCCATCGGTTGGGCCGGGGCAGGTTTTAAAGGATTTACTCTCCTCTAC
TGTAATTCCCACGGTGAAACTGACTGATATTTACCGCCAGGCGGACGGATCCTCCATCATTGAGCTAGCACATGATATGA
AGGATGGTGTGGTTCCAGCAAACATCGCACAGGCGCAAAAAGATCGTTCTTTTATCAAATGCCAACAAGCGCAAATTTTA
GATGTGGTCAAGAAGGTATGCGCAAATGCGCAAACGAAAGGTTATTCTGCCCGTGACATTCAAGTGCTTGCACCTATGTA
TCGTGGAAATGCAGGGATTGATAAATTAAACGAGATCTTACAAGAGCTCTTTAATCCGAAAAGCCCAAATAGGAGAGAAT
TAGCTTTTGGCAGCATTGTTTATCGCACAGGTGACAAAGTTCTGCAGCTAGTCAATCAGCCTGAAAGCAATGTGTTTAAT
GGCGATATTGGCGAAGTGGTCTCTATTTTTTACGCAAAAGAAAACACGGAAAAACAGGATATGGTGATTGTCTCCTTTGA
TGGAAACGAAGTAACCTATACAAAACAAGATCTCGGACAAATTACGCATGCCTATTGCTGTTCTATTCACAAATCACAAG
GAAGCGAGTTCCCGATTGTTGTCCTTCCTGTTGTGAAAAGCTACTATCGCATGCTACGCCGGAACTTATTGTATACAGCA
GTAACAAGGTCGAAAAAATTCCTAATCCTATGTGGAGAAGAGGATGCTTTAAGGCTAGGTGTCGGGCGAGCGGATGAACA
AGCTCGTCAGACCTCACTAAAGCAAAAGCTTGCGAATAAGCATAGTGTTGATTCTTTAGAAGAAGAAAATCCGGACATTT
TAAAGGAAATTCCATTTTGGCATGATGCCAACATTGGCATGGAAAATATCAGTCCTTACGATTTTCTTGAAGAAGAATAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (596-666)

• AAA domain (AAA_30) (348-556)

• Helix-hairpin-helix containing domain (HHH_RecD2) (161-252)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (683-731)

3D structure

• AlphaFold DB: A0A5P9HRS7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	64.721	98.623	0.638