Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | FIU87_RS13745 | Genome accession | NZ_CP045403 |
| Coordinates | 2614775..2615842 (-) | Length | 355 a.a. |
| NCBI ID | WP_152445116.1 | Uniprot ID | A0A5P9HQV8 |
| Organism | Bacillus sp. THAF10 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2609775..2620842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU87_RS13700 (FIU87_14085) | - | 2610424..2610690 (-) | 267 | WP_152445107.1 | phosphocarrier protein HPr | - |
| FIU87_RS13705 (FIU87_14090) | - | 2611052..2611231 (-) | 180 | WP_152445108.1 | YqzE family protein | - |
| FIU87_RS13710 (FIU87_14095) | - | 2611265..2611780 (-) | 516 | WP_152445109.1 | shikimate kinase | - |
| FIU87_RS13715 (FIU87_14100) | comGG | 2611844..2612218 (-) | 375 | WP_172971061.1 | competence type IV pilus minor pilin ComGG | - |
| FIU87_RS13720 (FIU87_14105) | comGF | 2612226..2612660 (-) | 435 | WP_152445111.1 | competence type IV pilus minor pilin ComGF | - |
| FIU87_RS13725 (FIU87_14110) | - | 2612644..2612979 (-) | 336 | WP_152445112.1 | type II secretion system protein | - |
| FIU87_RS13730 (FIU87_14115) | comGD | 2612963..2613430 (-) | 468 | WP_172971062.1 | competence type IV pilus minor pilin ComGD | - |
| FIU87_RS13735 (FIU87_14120) | comGC | 2613411..2613749 (-) | 339 | WP_152445114.1 | competence type IV pilus major pilin ComGC | - |
| FIU87_RS13740 (FIU87_14125) | comGB | 2613751..2614791 (-) | 1041 | WP_152445115.1 | competence type IV pilus assembly protein ComGB | - |
| FIU87_RS13745 (FIU87_14130) | comGA | 2614775..2615842 (-) | 1068 | WP_152445116.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FIU87_RS13750 (FIU87_14140) | - | 2616665..2617825 (-) | 1161 | WP_152445117.1 | FAD-dependent monooxygenase | - |
| FIU87_RS13755 (FIU87_14145) | - | 2617917..2618204 (-) | 288 | WP_152445118.1 | hypothetical protein | - |
| FIU87_RS13760 (FIU87_14150) | - | 2618340..2618669 (-) | 330 | WP_152445119.1 | hypothetical protein | - |
| FIU87_RS13765 (FIU87_14155) | - | 2619020..2619577 (-) | 558 | WP_152445120.1 | putative glycolipid-binding domain-containing protein | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 40603.05 Da Isoelectric Point: 9.2323
>NTDB_id=393806 FIU87_RS13745 WP_152445116.1 2614775..2615842(-) (comGA) [Bacillus sp. THAF10]
MNIEKKCEELIRQAVRLRVSDIHMKPLETTAHVLFRLDHYLYDQEKVPIEVYERMLSHLKFQAAMDIGETRKPQNGALAL
QVDSNQINLRLSTLPTLNRESLVIRILPQEDHQFSLKHLSLFQHSTRKIMSLMKHSHGLFIFTGPTGSGKTTTLYSILEE
SKSMLQRNIITLEDPVERKSRHVLQVQVNEKAGISYSSGLKAILRHDPDIIIVGEIRDEETAKIAIRAALTGHLVLSTLH
TRDAKGAIFRLLEFGVSHQDLEQSLIAVSAQRLVELTCPYCKEECSAFCKKYRTHRLASVYELLYGNELQKVLQQCRGNS
VLAAYPTLKEVIKKGIALGFIHQREYERWVNDGKK
MNIEKKCEELIRQAVRLRVSDIHMKPLETTAHVLFRLDHYLYDQEKVPIEVYERMLSHLKFQAAMDIGETRKPQNGALAL
QVDSNQINLRLSTLPTLNRESLVIRILPQEDHQFSLKHLSLFQHSTRKIMSLMKHSHGLFIFTGPTGSGKTTTLYSILEE
SKSMLQRNIITLEDPVERKSRHVLQVQVNEKAGISYSSGLKAILRHDPDIIIVGEIRDEETAKIAIRAALTGHLVLSTLH
TRDAKGAIFRLLEFGVSHQDLEQSLIAVSAQRLVELTCPYCKEECSAFCKKYRTHRLASVYELLYGNELQKVLQQCRGNS
VLAAYPTLKEVIKKGIALGFIHQREYERWVNDGKK
Nucleotide
Download Length: 1068 bp
>NTDB_id=393806 FIU87_RS13745 WP_152445116.1 2614775..2615842(-) (comGA) [Bacillus sp. THAF10]
ATGAATATTGAAAAAAAGTGTGAAGAATTAATCCGCCAGGCCGTTAGATTACGTGTTTCCGATATTCACATGAAACCCCT
TGAAACTACCGCACATGTCTTATTCCGCTTAGACCACTACCTTTACGATCAAGAAAAAGTCCCGATTGAAGTGTATGAAC
GAATGTTATCTCATCTGAAATTTCAAGCTGCCATGGACATAGGAGAAACTAGAAAGCCTCAAAACGGTGCGCTAGCCCTG
CAAGTAGATTCTAATCAAATCAACCTCCGACTCTCAACCTTGCCCACTTTAAACAGAGAAAGTCTTGTCATTCGTATACT
ACCTCAAGAAGACCATCAATTTTCCTTAAAACATCTCTCTCTTTTTCAGCATTCCACCAGAAAAATAATGTCCTTAATGA
AGCATTCCCATGGTCTGTTTATTTTTACAGGTCCGACTGGCTCTGGCAAAACCACAACGCTATATTCTATTTTGGAAGAA
TCCAAGAGCATGCTGCAGCGAAACATTATTACTTTGGAGGACCCTGTAGAGAGAAAAAGCAGGCATGTTTTGCAGGTCCA
GGTGAACGAGAAGGCAGGAATTAGCTACTCATCAGGATTAAAAGCAATACTCAGGCATGATCCGGATATTATAATCGTTG
GGGAAATAAGAGATGAAGAGACAGCGAAAATTGCTATCCGTGCTGCTCTCACAGGTCATTTAGTTTTAAGTACACTTCAT
ACAAGGGACGCAAAAGGAGCGATATTTAGATTACTTGAATTTGGTGTCTCCCATCAAGATCTGGAACAATCCTTAATTGC
CGTATCCGCACAAAGGCTAGTGGAGTTAACGTGTCCTTATTGCAAGGAGGAATGCTCTGCTTTTTGCAAAAAATATCGTA
CTCATCGTTTGGCGAGTGTTTATGAACTGCTTTATGGAAACGAATTGCAAAAGGTCTTACAACAATGTAGGGGAAATTCT
GTACTGGCGGCTTATCCTACTCTCAAAGAAGTGATAAAAAAAGGAATTGCCCTCGGGTTTATTCACCAGCGGGAATATGA
AAGATGGGTGAATGATGGCAAAAAATAA
ATGAATATTGAAAAAAAGTGTGAAGAATTAATCCGCCAGGCCGTTAGATTACGTGTTTCCGATATTCACATGAAACCCCT
TGAAACTACCGCACATGTCTTATTCCGCTTAGACCACTACCTTTACGATCAAGAAAAAGTCCCGATTGAAGTGTATGAAC
GAATGTTATCTCATCTGAAATTTCAAGCTGCCATGGACATAGGAGAAACTAGAAAGCCTCAAAACGGTGCGCTAGCCCTG
CAAGTAGATTCTAATCAAATCAACCTCCGACTCTCAACCTTGCCCACTTTAAACAGAGAAAGTCTTGTCATTCGTATACT
ACCTCAAGAAGACCATCAATTTTCCTTAAAACATCTCTCTCTTTTTCAGCATTCCACCAGAAAAATAATGTCCTTAATGA
AGCATTCCCATGGTCTGTTTATTTTTACAGGTCCGACTGGCTCTGGCAAAACCACAACGCTATATTCTATTTTGGAAGAA
TCCAAGAGCATGCTGCAGCGAAACATTATTACTTTGGAGGACCCTGTAGAGAGAAAAAGCAGGCATGTTTTGCAGGTCCA
GGTGAACGAGAAGGCAGGAATTAGCTACTCATCAGGATTAAAAGCAATACTCAGGCATGATCCGGATATTATAATCGTTG
GGGAAATAAGAGATGAAGAGACAGCGAAAATTGCTATCCGTGCTGCTCTCACAGGTCATTTAGTTTTAAGTACACTTCAT
ACAAGGGACGCAAAAGGAGCGATATTTAGATTACTTGAATTTGGTGTCTCCCATCAAGATCTGGAACAATCCTTAATTGC
CGTATCCGCACAAAGGCTAGTGGAGTTAACGTGTCCTTATTGCAAGGAGGAATGCTCTGCTTTTTGCAAAAAATATCGTA
CTCATCGTTTGGCGAGTGTTTATGAACTGCTTTATGGAAACGAATTGCAAAAGGTCTTACAACAATGTAGGGGAAATTCT
GTACTGGCGGCTTATCCTACTCTCAAAGAAGTGATAAAAAAAGGAATTGCCCTCGGGTTTATTCACCAGCGGGAATATGA
AAGATGGGTGAATGATGGCAAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.857 |
98.592 |
0.561 |