Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FIU87_RS06655 Genome accession   NZ_CP045403
Coordinates   1264262..1265221 (+) Length   319 a.a.
NCBI ID   WP_152446449.1    Uniprot ID   -
Organism   Bacillus sp. THAF10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1259262..1270221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIU87_RS06630 (FIU87_06850) - 1259330..1259509 (+) 180 WP_152443850.1 YjzC family protein -
  FIU87_RS06635 (FIU87_06855) clpB 1259618..1262212 (+) 2595 WP_152443851.1 ATP-dependent chaperone ClpB -
  FIU87_RS06640 (FIU87_06860) - 1262266..1262448 (-) 183 WP_152443852.1 YjzD family protein -
  FIU87_RS06645 (FIU87_06865) - 1262720..1263469 (+) 750 WP_253905528.1 hypothetical protein -
  FIU87_RS06650 (FIU87_06870) - 1263524..1264108 (+) 585 WP_152443853.1 hypothetical protein -
  FIU87_RS06655 (FIU87_06875) med 1264262..1265221 (+) 960 WP_152446449.1 BMP family ABC transporter substrate-binding protein Regulator
  FIU87_RS06660 (FIU87_06880) - 1265261..1265494 (-) 234 WP_152443854.1 hypothetical protein -
  FIU87_RS06665 (FIU87_06885) - 1265726..1266658 (+) 933 WP_152443855.1 beta-ketoacyl-ACP synthase III -
  FIU87_RS06670 (FIU87_06890) fabF 1266921..1268159 (+) 1239 WP_152446450.1 beta-ketoacyl-ACP synthase II -
  FIU87_RS06675 (FIU87_06895) - 1268278..1269060 (+) 783 WP_152443856.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35595.22 Da        Isoelectric Point: 4.5622

>NTDB_id=393793 FIU87_RS06655 WP_152446449.1 1264262..1265221(+) (med) [Bacillus sp. THAF10]
MKRTLMLFISIIFILFLSVACGQSVPSVEEQKVGLLVPDSINDQVWGTKGYKGLLRIQTEYEVDVYYQEGIHTDQAIKKS
VKEFHKDGVTLIFGHGSEYAKAFNSIAKDYPDIHFVCFNSDVRGDNVTSLNFESNAMGFFGGMVAGQMTQSNNVGIIAAF
EWQPEVNGFFEGVLHENPDARVLIDYTQDWNDPDKALIALQDMMNKGVDVVYPAGDGFNVPVINTLKENGLLAVGYVSDQ
SDLGENTVLTSTVQHVPALYELVAKRHFLGELKGGNQYFDFKDDVISLGKFSPLVSEDYQKSMQQQINRYKESGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=393793 FIU87_RS06655 WP_152446449.1 1264262..1265221(+) (med) [Bacillus sp. THAF10]
ATGAAAAGAACATTAATGCTATTTATATCTATCATATTTATTCTTTTTTTATCCGTTGCATGTGGACAATCTGTTCCAAG
TGTAGAAGAACAAAAAGTTGGTTTATTAGTTCCGGATAGCATCAATGACCAGGTATGGGGAACGAAAGGCTATAAGGGAT
TATTGCGAATACAAACGGAATATGAAGTGGACGTTTATTATCAAGAAGGCATACATACTGATCAAGCGATAAAGAAATCC
GTCAAAGAATTTCACAAAGATGGAGTTACTTTAATTTTTGGCCACGGAAGCGAATATGCAAAAGCCTTTAATTCTATCGC
AAAAGATTATCCAGACATTCATTTTGTTTGCTTCAATTCTGATGTTCGTGGCGATAATGTTACCAGCTTGAATTTCGAAT
CAAATGCAATGGGCTTTTTTGGAGGAATGGTAGCTGGGCAGATGACACAATCAAATAATGTGGGCATTATTGCTGCTTTT
GAATGGCAGCCTGAAGTAAATGGTTTCTTTGAAGGAGTTTTGCATGAGAACCCAGATGCAAGGGTACTAATTGATTATAC
TCAAGATTGGAATGACCCTGATAAGGCTTTAATCGCCTTGCAAGACATGATGAATAAAGGGGTAGACGTTGTTTATCCTG
CTGGTGATGGCTTTAATGTGCCTGTTATCAATACGTTAAAAGAAAATGGCCTTTTAGCTGTGGGGTATGTTTCCGATCAA
TCGGATCTTGGTGAAAACACCGTCCTTACAAGCACGGTACAGCATGTTCCTGCATTATATGAGTTAGTAGCCAAGAGGCA
CTTTCTTGGTGAGTTAAAGGGTGGAAATCAATACTTTGACTTTAAGGATGATGTCATTTCACTCGGTAAATTTAGTCCAT
TGGTTAGTGAAGACTATCAAAAATCAATGCAGCAACAAATTAACAGATATAAAGAATCTGGCAAATTGCCTAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.681

99.373

0.524

Multiple sequence alignment