Detailed information NTG0393785

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: HP432_RS03405
• Genome accession: NZ_CP053730
• Coordinates: 506664..507647 (-)
• Length: 327 a.a.
• NCBI ID: WP_096176831.1
• Uniprot ID: -
• Organism: Escherichia coli strain CP61_Sichuan
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 501664..512647

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HP432_RS03380 (HP432_03385)	bcsF	501858..502016 (+)	159	WP_042100273.1	cellulose biosynthesis protein BcsF	-
HP432_RS03385 (HP432_03390)	bcsG	502013..503692 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
HP432_RS03390 (HP432_03395)	ldrD	503779..503886 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
HP432_RS03395 (HP432_03400)	yhjV	504362..505633 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
HP432_RS03400 (HP432_03405)	dppF	505663..506667 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
HP432_RS03405 (HP432_03410)	amiE	506664..507647 (-)	984	WP_096176831.1	dipeptide ABC transporter ATP-binding protein	Regulator
HP432_RS03410 (HP432_03415)	dppC	507658..508560 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
HP432_RS03415 (HP432_03420)	dppB	508570..509589 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
HP432_RS23360	-	509753..509863 (+)	111	Protein_491	hypothetical protein	-
HP432_RS03420 (HP432_03425)	dppA	509897..511504 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35878.38 Da
• Isoelectric Point: 6.5814

>NTDB_id=393785 HP432_RS03405 WP_096176831.1 506664..507647(-) (amiE) [Escherichia coli strain CP61_Sichuan]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLFNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=393785 HP432_RS03405 WP_096176831.1 506664..507647(-) (amiE) [Escherichia coli strain CP61_Sichuan]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGTTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407